RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 HDAC9Q9UKV0 1011 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 ZNRF3Q9ULT6 936 aa13.47□□□□□ -0.25
PRKCB-207ENST00000486868 NAV1Q8NEY1 1877 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 IGKV6D-41A0A0C4DH26 115 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 A0A1W2PQ27 194 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 A0A1W2PQ64 194 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 A0A1W2PQD8 194 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 FAM173BQ6P4H8 233 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 KIAA0825Q8IV33 1275 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 USP28Q96RU2 1077 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRKCB-207ENST00000486868 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 SH3GLB2Q9NR46 395 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
PRKCB-207ENST00000486868 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
PRKCB-207ENST00000486868 PI4KBQ9UBF8 816 aa13.46□□□□□ -0.25
PRKCB-207ENST00000486868 ATRNL1Q5VV63 1379 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 CNTNAP5Q8WYK1 1306 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
PRKCB-207ENST00000486868 ZBTB7AO95365 584 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 PKN1Q16512 942 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 LINC00301Q8NCQ3 95 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
PRKCB-207ENST00000486868 NMT2O60551 498 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 PPP6R2O75170 966 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 ANO1Q5XXA6 986 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 ADALQ6DHV7 355 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 OTUD7BQ6GQQ9 843 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 GALNT17Q6IS24 598 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 NOSTRINQ8IVI9 506 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 SRBD1Q8N5C6 995 aaKnown RBP13.44□□□□□ -0.26
PRKCB-207ENST00000486868 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 SLC44A5Q8NCS7 719 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRKCB-207ENST00000486868 PGBD1Q96JS3 809 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
PRKCB-207ENST00000486868 MTMR4Q9NYA4 1195 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 SYNPO2Q9UMS6 1093 aa13.44□□□□□ -0.26
PRKCB-207ENST00000486868 FOCADQ5VW36 1801 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 GUCY1A2P33402 732 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 SHMT1P34896 483 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 PICALMQ13492 652 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 GNL2Q13823 731 aaKnown RBP13.43□□□□□ -0.26
PRKCB-207ENST00000486868 SLC39A14Q15043 492 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-207ENST00000486868 CFAP100Q494V2 611 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 GAS2L3Q86XJ1 694 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 OGFOD1Q8N543 542 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 PHF20Q9BVI0 1012 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 TAOK3Q9H2K8 898 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 GRPEL1Q9HAV7 217 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 TMOD2Q9NZR1 351 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 MAD2L2Q9UI95 211 aa13.43□□□□□ -0.26
PRKCB-207ENST00000486868 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-207ENST00000486868 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-207ENST00000486868 ZNF646O15015 1829 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-207ENST00000486868 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 PSMD14O00487 310 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 SPTLC2O15270 562 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 CTAGE5O15320 804 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 BMP15O95972 392 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 SCG2P13521 617 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 RPS12P25398 132 aaKnown RBP13.42□□□□□ -0.26
PRKCB-207ENST00000486868 CALML3P27482 149 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 RBM5P52756 815 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRKCB-207ENST00000486868 FOSBP53539 338 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 NFIAQ12857 509 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 STK38Q15208 465 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 TATDN1Q6P1N9 297 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 RBM43Q6ZSC3 357 aaKnown RBP13.42□□□□□ -0.26
PRKCB-207ENST00000486868 DIS3L2Q8IYB7 885 aaKnown RBP13.42□□□□□ -0.26
PRKCB-207ENST00000486868 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-207ENST00000486868 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
PRKCB-207ENST00000486868 hCG_1984214I3L0E3 225 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 TTLL1O95922 423 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 PARP1P09874 1014 aaKnown RBP13.41□□□□□ -0.26
PRKCB-207ENST00000486868 KRT2P35908 639 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 TRAPPC10P48553 1259 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 TNIP1Q15025 636 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 ASPRV1Q53RT3 343 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 ZNF713Q8N859 430 aaPredicted RBP13.41□□□□□ -0.26
PRKCB-207ENST00000486868 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms