RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 CHMLP26374 656 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 PPARAQ07869 468 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 SEPT2Q15019 361 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 TAF1CQ15572 869 aaPredicted RBP15.7■□□□□ 0.1
SF1-216ENST00000486867 BMP2KLQ5H9B9 411 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 COL13A1Q5TAT6 717 aaPredicted RBP15.7■□□□□ 0.1
SF1-216ENST00000486867 CWC27Q6UX04 472 aaKnown RBP15.7■□□□□ 0.1
SF1-216ENST00000486867 SIAH1Q8IUQ4 282 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 DSCC1Q9BVC3 393 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.7■□□□□ 0.1
SF1-216ENST00000486867 IL25Q9H293 177 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 ZFYVE28Q9HCC9 887 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.7■□□□□ 0.1
SF1-216ENST00000486867 A0A0G2JMZ2 1700 aa15.7■□□□□ 0.1
SF1-216ENST00000486867 MINDY4BA8MYZ0 360 aa15.69■□□□□ 0.1
SF1-216ENST00000486867 HOXA7P31268 230 aaPredicted RBP15.69■□□□□ 0.1
SF1-216ENST00000486867 HMGCS2P54868 508 aa15.69■□□□□ 0.1
SF1-216ENST00000486867 MTMR2Q13614 643 aa15.69■□□□□ 0.1
SF1-216ENST00000486867 ZNF296Q8WUU4 475 aaPredicted RBP15.69■□□□□ 0.1
SF1-216ENST00000486867 ZNF287Q9HBT7 754 aa15.69■□□□□ 0.1
SF1-216ENST00000486867 COL11A1P12107 1806 aaPredicted RBP15.68■□□□□ 0.1
SF1-216ENST00000486867 IGKV6D-41A0A0C4DH26 115 aa15.68■□□□□ 0.1
SF1-216ENST00000486867 FKTNO75072 461 aa15.68■□□□□ 0.1
SF1-216ENST00000486867 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
SF1-216ENST00000486867 TREML2Q5T2D2 321 aa15.68■□□□□ 0.1
SF1-216ENST00000486867 USP17L2Q6R6M4 530 aa15.68■□□□□ 0.1
SF1-216ENST00000486867 C17orf99Q6UX52 265 aa15.68■□□□□ 0.1
SF1-216ENST00000486867 PARK7Q99497 189 aaKnown RBP15.68■□□□□ 0.1
SF1-216ENST00000486867 EMILIN3Q9NT22 766 aa15.68■□□□□ 0.1
SF1-216ENST00000486867 A0A1W2PRG0 241 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 ORC4O43929 436 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 BCRP11274 1271 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 USP14P54578 494 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 PDE4BQ07343 736 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 GADL1Q6ZQY3 521 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 SKAP1Q86WV1 359 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 ACER1Q8TDN7 264 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 RUFY2Q8WXA3 655 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 KANSL2Q9H9L4 492 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 TACC3Q9Y6A5 838 aa15.67■□□□□ 0.1
SF1-216ENST00000486867 SGSM2O43147 1006 aa15.66■□□□□ 0.1
SF1-216ENST00000486867 SLC3A2P08195 630 aaKnown RBP15.66■□□□□ 0.1
SF1-216ENST00000486867 PCP11498 1178 aaKnown RBP15.66■□□□□ 0.1
SF1-216ENST00000486867 PABPC4Q13310 644 aaKnown RBP eCLIP15.66■□□□□ 0.11e-9■□□□□ 8.7
SF1-216ENST00000486867 NEDD1Q8NHV4 660 aa15.66■□□□□ 0.1
SF1-216ENST00000486867 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
SF1-216ENST00000486867 SYNPO2Q9UMS6 1093 aa15.66■□□□□ 0.1
SF1-216ENST00000486867 TMX2Q9Y320 296 aa15.66■□□□□ 0.1
SF1-216ENST00000486867 MPHOSPH10O00566 681 aaKnown RBP15.65■□□□□ 0.1
SF1-216ENST00000486867 NOVP48745 357 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 NT5C2P49902 561 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 SP3Q02447 781 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 ICA1Q05084 483 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 DGKZQ13574 1117 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 ASCC2Q9H1I8 757 aaPredicted RBP15.65■□□□□ 0.1
SF1-216ENST00000486867 MKNK2Q9HBH9 465 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 TMOD4Q9NZQ9 345 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 NYAP2Q9P242 653 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 PNMA3Q9UL41 463 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 PLXNB2O15031 1838 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 HTTP42858 3142 aa15.65■□□□□ 0.1
SF1-216ENST00000486867 CTDSPL2Q05D32 466 aa15.64■□□□□ 0.09
SF1-216ENST00000486867 STAG1Q8WVM7 1258 aa15.64■□□□□ 0.09
SF1-216ENST00000486867 LPAR1Q92633 364 aa15.64■□□□□ 0.09
SF1-216ENST00000486867 MKL1Q969V6 931 aa15.64■□□□□ 0.09
SF1-216ENST00000486867 FEZ1Q99689 392 aa15.64■□□□□ 0.09
SF1-216ENST00000486867 SH2D4AQ9H788 454 aa15.64■□□□□ 0.09
SF1-216ENST00000486867 ARHGEF10LQ9HCE6 1279 aa15.64■□□□□ 0.09
SF1-216ENST00000486867 PRDM1O75626 825 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 CYP2C8P10632 490 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 EEF2P13639 858 aaKnown RBP15.63■□□□□ 0.09
SF1-216ENST00000486867 VCAM1P19320 739 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
SF1-216ENST00000486867 CAP1Q01518 475 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 LBX2Q6XYB7 198 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 CTU1Q7Z7A3 348 aaKnown RBP15.63■□□□□ 0.09
SF1-216ENST00000486867 CLEC10AQ8IUN9 316 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 ZNF444Q8N0Y2 327 aaPredicted RBP15.63■□□□□ 0.09
SF1-216ENST00000486867 ERO1AQ96HE7 468 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 VCPKMTQ9H867 229 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 MTMR4Q9NYA4 1195 aa15.63■□□□□ 0.09
SF1-216ENST00000486867 ZNFX1Q9P2E3 1918 aaKnown RBP15.62■□□□□ 0.09
SF1-216ENST00000486867 OSBPP22059 807 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 LACTBP83111 547 aaPredicted RBP15.62■□□□□ 0.09
SF1-216ENST00000486867 FAM110CQ1W6H9 321 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 KIAA1755Q5JYT7 1200 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 AKNAD1Q5T1N1 836 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 CATSPERGQ6ZRH7 1159 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 TBC1D10CQ8IV04 446 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 MORF4L1Q9UBU8 362 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 CTNNA3Q9UI47 895 aa15.62■□□□□ 0.09
SF1-216ENST00000486867 USP17L15C9J2P7 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L13C9JLJ4 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L11C9JVI0 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L18D6R9N7 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L22D6RA61 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L17D6RBQ6 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L19D6RCP7 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L20D6RJB6 530 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms