RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 LMBRD1Q9NUN5 540 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 GGA1Q9UJY5 639 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 MTMR6Q9Y217 621 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
TMC1-204ENST00000486417 POTEMA6NI47 508 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 JAK2O60674 1132 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 MMP10P09238 476 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 JUNDP17535 347 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 PRDX5P30044 214 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 DYNLL1P63167 89 aaKnown RBP8.49□□□□□ -1.05
TMC1-204ENST00000486417 MECOMQ03112 1051 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 KCNA1Q09470 495 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 TRDNQ13061 729 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 EZH2Q15910 746 aaKnown RBP8.49□□□□□ -1.05
TMC1-204ENST00000486417 MSL1Q68DK7 614 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 TMED8Q6PL24 325 aaPredicted RBP8.49□□□□□ -1.05
TMC1-204ENST00000486417 CYB5R4Q7L1T6 521 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 TDRD7Q8NHU6 1098 aaKnown RBP8.49□□□□□ -1.05
TMC1-204ENST00000486417 SMARCC2Q8TAQ2 1214 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 ZNF274Q96GC6 653 aaPredicted RBP8.49□□□□□ -1.05
TMC1-204ENST00000486417 LLPHQ9BRT6 129 aaKnown RBP8.49□□□□□ -1.05
TMC1-204ENST00000486417 PARP3Q9Y6F1 533 aa8.49□□□□□ -1.05
TMC1-204ENST00000486417 VPS37CA5D8V6 355 aaPredicted RBP8.48□□□□□ -1.05
TMC1-204ENST00000486417 B4E1Z4 1266 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 SH2B2O14492 632 aaPredicted RBP8.48□□□□□ -1.05
TMC1-204ENST00000486417 SRGNP10124 158 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 NPR1P16066 1061 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 PDCP20941 246 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 PDIA3P30101 505 aaKnown RBP8.48□□□□□ -1.05
TMC1-204ENST00000486417 KLHL40Q2TBA0 621 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
TMC1-204ENST00000486417 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 SP8Q8IXZ3 490 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 NSUN7Q8NE18 718 aaKnown RBP8.48□□□□□ -1.05
TMC1-204ENST00000486417 NKX2-3Q8TAU0 364 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 WDR66Q8TBY9 1149 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 SDR42E1Q8WUS8 393 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 STAG1Q8WVM7 1258 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 CAMKK2Q96RR4 588 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 TFIP11Q9UBB9 837 aaKnown RBP8.48□□□□□ -1.05
TMC1-204ENST00000486417 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
TMC1-204ENST00000486417 JAG2Q9Y219 1238 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 TACC3Q9Y6A5 838 aa8.48□□□□□ -1.05
TMC1-204ENST00000486417 ADAMTSL1Q8N6G6 1762 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 KLF18A0A0U1RQI7 1052 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 PTPDC1A2A3K4 754 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 GOLGA8BA8MQT2 603 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 NR1I2O75469 434 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 CTDNEP1O95476 244 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 IL1R1P14778 569 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 PDE6BP35913 854 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 HMGN5P82970 282 aaKnown RBP8.47□□□□□ -1.05
TMC1-204ENST00000486417 PPARAQ07869 468 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 SLC15A2Q16348 729 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 LARP1BQ659C4 914 aaKnown RBP8.47□□□□□ -1.05
TMC1-204ENST00000486417 CDC37L1Q7L3B6 337 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 DZIP1Q86YF9 867 aaKnown RBP8.47□□□□□ -1.05
TMC1-204ENST00000486417 TBC1D16Q8TBP0 767 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 KCTD12Q96CX2 325 aaKnown RBP8.47□□□□□ -1.05
TMC1-204ENST00000486417 TMEM87BQ96K49 555 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 KRT23Q9C075 422 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 CNNM2Q9H8M5 875 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
TMC1-204ENST00000486417 CD209Q9NNX6 404 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 STK32BQ9NY57 414 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 ANAPC4Q9UJX5 808 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 NAP1L2Q9ULW6 460 aaPredicted RBP8.47□□□□□ -1.05
TMC1-204ENST00000486417 ATP6V0A2Q9Y487 856 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 ATP6V1DQ9Y5K8 247 aa8.47□□□□□ -1.05
TMC1-204ENST00000486417 DDX49Q9Y6V7 483 aaKnown RBP8.47□□□□□ -1.05
TMC1-204ENST00000486417 SLX4Q8IY92 1834 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 PIK3CDO00329 1044 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 PRPF40AO75400 957 aaKnown RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 LDHBP07195 334 aaKnown RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 CCT2P78371 535 aaKnown RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 FOXD4L6Q3SYB3 417 aaPredicted RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 GIMAP6Q6P9H5 292 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 FOXD4L3Q6VB84 417 aaPredicted RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 MFSD6Q6ZSS7 791 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 TMEM87AQ8NBN3 555 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 CHMP4CQ96CF2 233 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 SPSB2Q99619 263 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 OCSTAMPQ9BR26 566 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 CRNKL1Q9BZJ0 848 aaKnown RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 RNF41Q9H4P4 317 aaPredicted RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 INCENPQ9NQS7 918 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 AATFQ9NY61 560 aaKnown RBP eCLIP8.46□□□□□ -1.05
TMC1-204ENST00000486417 POLLQ9UGP5 575 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 FKBPLQ9UIM3 349 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 BRPF3Q9ULD4 1205 aa8.46□□□□□ -1.05
TMC1-204ENST00000486417 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.05
TMC1-204ENST00000486417 NID2Q14112 1375 aa8.46□□□□□ -1.06
TMC1-204ENST00000486417 KIF13BQ9NQT8 1826 aa8.46□□□□□ -1.06
TMC1-204ENST00000486417 LMOD1P29536 600 aaPredicted RBP8.45□□□□□ -1.06
TMC1-204ENST00000486417 ALDH1B1P30837 517 aa8.45□□□□□ -1.06
TMC1-204ENST00000486417 CTHP32929 405 aa8.45□□□□□ -1.06
TMC1-204ENST00000486417 GSTO1P78417 241 aa8.45□□□□□ -1.06
TMC1-204ENST00000486417 GRIK5Q16478 980 aa8.45□□□□□ -1.06
TMC1-204ENST00000486417 PTPRNQ16849 979 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms