RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 USP17L13C9JLJ4 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L11C9JVI0 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L18D6R9N7 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L22D6RA61 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L17D6RBQ6 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L19D6RCP7 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L20D6RJB6 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 TFRCP02786 760 aaKnown RBP27.11■■□□□ 1.93
SREBF1-214ENST00000486311 MAPK4P31152 587 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 GUCY1A2P33402 732 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 ADD2P35612 726 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 USP17L24Q0WX57 530 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 ZYXQ15942 572 aaKnown RBP27.11■■□□□ 1.93
SREBF1-214ENST00000486311 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.11■■□□□ 1.93
SREBF1-214ENST00000486311 MYH1P12882 1939 aa27.11■■□□□ 1.93
SREBF1-214ENST00000486311 CEP290O15078 2479 aa27.1■■□□□ 1.93
SREBF1-214ENST00000486311 EVX2Q03828 476 aa27.1■■□□□ 1.93
SREBF1-214ENST00000486311 SOCS4Q8WXH5 440 aa27.1■■□□□ 1.93
SREBF1-214ENST00000486311 NUDT12Q9BQG2 462 aa27.1■■□□□ 1.93
SREBF1-214ENST00000486311 LRRCC1Q9C099 1032 aa27.1■■□□□ 1.93
SREBF1-214ENST00000486311 ARMT1Q9H993 441 aa27.1■■□□□ 1.93
SREBF1-214ENST00000486311 COLQQ9Y215 455 aaPredicted RBP27.1■■□□□ 1.93
SREBF1-214ENST00000486311 DDX60LQ5H9U9 1706 aaKnown RBP27.1■■□□□ 1.93
SREBF1-214ENST00000486311 XRCC5P13010 732 aaKnown RBP27.09■■□□□ 1.93
SREBF1-214ENST00000486311 VCAM1P19320 739 aa27.09■■□□□ 1.93
SREBF1-214ENST00000486311 CATSPERGQ6ZRH7 1159 aa27.09■■□□□ 1.93
SREBF1-214ENST00000486311 PAGR1Q9BTK6 254 aa27.09■■□□□ 1.93
SREBF1-214ENST00000486311 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.09■■□□□ 1.932e-9■■■■■ 28.3
SREBF1-214ENST00000486311 PORCNQ9H237 461 aa27.09■■□□□ 1.93
SREBF1-214ENST00000486311 RABGAP1Q9Y3P9 1069 aa27.09■■□□□ 1.93
SREBF1-214ENST00000486311 DOCK3Q8IZD9 2030 aa27.08■■□□□ 1.93
SREBF1-214ENST00000486311 CYP2B6P20813 491 aa27.08■■□□□ 1.93
SREBF1-214ENST00000486311 TRIM32Q13049 653 aa27.08■■□□□ 1.93
SREBF1-214ENST00000486311 SLFNL1Q499Z3 407 aa27.08■■□□□ 1.93
SREBF1-214ENST00000486311 TRIB2Q92519 343 aa27.08■■□□□ 1.93
SREBF1-214ENST00000486311 RPTORQ8N122 1335 aa27.08■■□□□ 1.93
SREBF1-214ENST00000486311 MBD4O95243 580 aa27.07■■□□□ 1.92
SREBF1-214ENST00000486311 CYP2D6P10635 497 aa27.07■■□□□ 1.92
SREBF1-214ENST00000486311 SEPT2Q15019 361 aa27.07■■□□□ 1.92
SREBF1-214ENST00000486311 GPR142Q7Z601 462 aa27.07■■□□□ 1.92
SREBF1-214ENST00000486311 CCAR1Q8IX12 1150 aaKnown RBP27.07■■□□□ 1.92
SREBF1-214ENST00000486311 USP6NLQ92738 828 aa27.07■■□□□ 1.92
SREBF1-214ENST00000486311 ATP8A2Q9NTI2 1148 aa27.07■■□□□ 1.92
SREBF1-214ENST00000486311 CNMDO75829 334 aa27.06■■□□□ 1.92
SREBF1-214ENST00000486311 FXR1P51114 621 aaKnown RBP eCLIP27.06■■□□□ 1.92
SREBF1-214ENST00000486311 UBE3CQ15386 1083 aa27.06■■□□□ 1.92
SREBF1-214ENST00000486311 MAP3K21Q5TCX8 1036 aa27.06■■□□□ 1.92
SREBF1-214ENST00000486311 LBX2Q6XYB7 198 aa27.06■■□□□ 1.92
SREBF1-214ENST00000486311 PLEKHH3Q7Z736 793 aa27.06■■□□□ 1.92
SREBF1-214ENST00000486311 HMX1Q9NP08 348 aaPredicted RBP27.06■■□□□ 1.92
SREBF1-214ENST00000486311 SWAP70Q9UH65 585 aa27.06■■□□□ 1.92
SREBF1-214ENST00000486311 PRKAB2O43741 272 aa27.05■■□□□ 1.92
SREBF1-214ENST00000486311 MORN1Q5T089 497 aa27.05■■□□□ 1.92
SREBF1-214ENST00000486311 TRMT44Q8IYL2 757 aaKnown RBP27.05■■□□□ 1.92
SREBF1-214ENST00000486311 MPHOSPH10O00566 681 aaKnown RBP27.04■■□□□ 1.92
SREBF1-214ENST00000486311 SMARCA5O60264 1052 aaPredicted RBP27.04■■□□□ 1.92
SREBF1-214ENST00000486311 CCNA1P78396 465 aa27.04■■□□□ 1.92
SREBF1-214ENST00000486311 ANKLE1Q8NAG6 615 aa27.04■■□□□ 1.92
SREBF1-214ENST00000486311 SLC44A5Q8NCS7 719 aa27.04■■□□□ 1.92
SREBF1-214ENST00000486311 RPAP3Q9H6T3 665 aaPredicted RBP27.04■■□□□ 1.92
SREBF1-214ENST00000486311 NR2E3Q9Y5X4 410 aa27.04■■□□□ 1.92
SREBF1-214ENST00000486311 A0A1W2PRG0 241 aa27.03■■□□□ 1.92
SREBF1-214ENST00000486311 CHGBP05060 677 aa27.03■■□□□ 1.92
SREBF1-214ENST00000486311 RGS2P41220 211 aa27.03■■□□□ 1.92
SREBF1-214ENST00000486311 TMEM179Q6ZVK1 233 aa27.03■■□□□ 1.92
SREBF1-214ENST00000486311 NAV1Q8NEY1 1877 aa27.03■■□□□ 1.92
SREBF1-214ENST00000486311 DYNLL2Q96FJ2 89 aa27.03■■□□□ 1.92
SREBF1-214ENST00000486311 PRKAR2AP13861 404 aaKnown RBP27.02■■□□□ 1.92
SREBF1-214ENST00000486311 ZKSCAN1P17029 563 aaPredicted RBP27.02■■□□□ 1.92
SREBF1-214ENST00000486311 ZSCAN25Q6NSZ9 544 aa27.02■■□□□ 1.92
SREBF1-214ENST00000486311 CHRDL2Q6WN34 429 aa27.02■■□□□ 1.92
SREBF1-214ENST00000486311 PAWRQ96IZ0 340 aaKnown RBP27.02■■□□□ 1.92
SREBF1-214ENST00000486311 ECHDC1Q9NTX5 307 aa27.02■■□□□ 1.92
SREBF1-214ENST00000486311 SPDYE16A6NNV3 312 aaPredicted RBP27.01■■□□□ 1.91
SREBF1-214ENST00000486311 C12orf60Q5U649 245 aa27.01■■□□□ 1.91
SREBF1-214ENST00000486311 NECAB2Q7Z6G3 386 aa27.01■■□□□ 1.91
SREBF1-214ENST00000486311 APBA2Q99767 749 aa27.01■■□□□ 1.91
SREBF1-214ENST00000486311 DCTPP1Q9H773 170 aa27.01■■□□□ 1.91
SREBF1-214ENST00000486311 CWC22Q9HCG8 908 aaKnown RBP27.01■■□□□ 1.91
SREBF1-214ENST00000486311 BTBD7Q9P203 1132 aa27.01■■□□□ 1.91
SREBF1-214ENST00000486311 PLXNB2O15031 1838 aa27.01■■□□□ 1.91
SREBF1-214ENST00000486311 GLRX3O76003 335 aaKnown RBP27■■□□□ 1.91
SREBF1-214ENST00000486311 DIS3LQ8TF46 1054 aaKnown RBP27■■□□□ 1.91
SREBF1-214ENST00000486311 USP17L12C9JPN9 530 aa26.99■■□□□ 1.91
SREBF1-214ENST00000486311 USP17L21D6R901 530 aa26.99■■□□□ 1.91
SREBF1-214ENST00000486311 AKR1B1P15121 316 aa26.99■■□□□ 1.91
SREBF1-214ENST00000486311 MAP2K5Q13163 448 aa26.99■■□□□ 1.91
SREBF1-214ENST00000486311 AMOTL1Q8IY63 956 aa26.99■■□□□ 1.91
SREBF1-214ENST00000486311 PUS7LQ9H0K6 701 aaKnown RBP26.99■■□□□ 1.91
SREBF1-214ENST00000486311 OGDHLQ9ULD0 1010 aa26.99■■□□□ 1.91
SREBF1-214ENST00000486311 SLC4A4Q9Y6R1 1079 aa26.99■■□□□ 1.91
SREBF1-214ENST00000486311 RANBP2P49792 3224 aaKnown RBP26.99■■□□□ 1.91
SREBF1-214ENST00000486311 CYP2D7A0A087X1C5 515 aa26.98■■□□□ 1.91
SREBF1-214ENST00000486311 EVI5O60447 810 aa26.98■■□□□ 1.91
SREBF1-214ENST00000486311 MNX1P50219 401 aaPredicted RBP26.98■■□□□ 1.91
SREBF1-214ENST00000486311 CACNB2Q08289 660 aaPredicted RBP26.98■■□□□ 1.91
SREBF1-214ENST00000486311 COG2Q14746 738 aa26.98■■□□□ 1.91
SREBF1-214ENST00000486311 CCL14Q16627 93 aa26.98■■□□□ 1.91
SREBF1-214ENST00000486311 SIAH1Q8IUQ4 282 aa26.98■■□□□ 1.91
SREBF1-214ENST00000486311 DDRGK1Q96HY6 314 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms