RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 MAPK4P31152 587 aa16.39■□□□□ 0.21
DCLK1-207ENST00000486239 CCNA1P78396 465 aa16.39■□□□□ 0.21
DCLK1-207ENST00000486239 USP17L24Q0WX57 530 aa16.39■□□□□ 0.21
DCLK1-207ENST00000486239 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
DCLK1-207ENST00000486239 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
DCLK1-207ENST00000486239 GCC1Q96CN9 775 aa16.39■□□□□ 0.21
DCLK1-207ENST00000486239 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.21
DCLK1-207ENST00000486239 DOCK3Q8IZD9 2030 aa16.39■□□□□ 0.21
DCLK1-207ENST00000486239 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
DCLK1-207ENST00000486239 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
DCLK1-207ENST00000486239 GNAT2P19087 354 aa16.38■□□□□ 0.21
DCLK1-207ENST00000486239 EN2P19622 333 aaPredicted RBP16.38■□□□□ 0.21
DCLK1-207ENST00000486239 JAG1P78504 1218 aa16.38■□□□□ 0.21
DCLK1-207ENST00000486239 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
DCLK1-207ENST00000486239 LPAR1Q92633 364 aa16.38■□□□□ 0.21
DCLK1-207ENST00000486239 EMILIN3Q9NT22 766 aa16.38■□□□□ 0.21
DCLK1-207ENST00000486239 MPHOSPH10O00566 681 aaKnown RBP16.37■□□□□ 0.21
DCLK1-207ENST00000486239 CCL5P13501 91 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 GJA8P48165 433 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 C12orf60Q5U649 245 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 APPBP2Q92624 585 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 RNF208Q9H0X6 261 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 GABRQQ9UN88 632 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 RABGAP1Q9Y3P9 1069 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
DCLK1-207ENST00000486239 ECM2O94769 699 aaPredicted RBP16.36■□□□□ 0.21
DCLK1-207ENST00000486239 HMGCRP04035 888 aa16.36■□□□□ 0.21
DCLK1-207ENST00000486239 INHAP05111 366 aa16.36■□□□□ 0.21
DCLK1-207ENST00000486239 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
DCLK1-207ENST00000486239 VCAM1P19320 739 aa16.36■□□□□ 0.21
DCLK1-207ENST00000486239 ERVK-9P63128 1117 aa16.36■□□□□ 0.21
DCLK1-207ENST00000486239 ERVK-24P63145 666 aa16.36■□□□□ 0.21
DCLK1-207ENST00000486239 P2RX7Q99572 595 aaKnown RBP16.36■□□□□ 0.21
DCLK1-207ENST00000486239 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
DCLK1-207ENST00000486239 MTFR1Q15390 333 aa16.35■□□□□ 0.21
DCLK1-207ENST00000486239 CATSPERGQ6ZRH7 1159 aa16.35■□□□□ 0.21
DCLK1-207ENST00000486239 C16orf86Q6ZW13 317 aa16.35■□□□□ 0.21
DCLK1-207ENST00000486239 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
DCLK1-207ENST00000486239 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
DCLK1-207ENST00000486239 PCDHB15Q9Y5E8 787 aa16.35■□□□□ 0.21
DCLK1-207ENST00000486239 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 USP17L21D6R901 530 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
DCLK1-207ENST00000486239 MX1P20591 662 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 ICA1Q05084 483 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
DCLK1-207ENST00000486239 SEPT2Q15019 361 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
DCLK1-207ENST00000486239 SHROOM1Q2M3G4 852 aaPredicted RBP16.34■□□□□ 0.21
DCLK1-207ENST00000486239 SBK1Q52WX2 424 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 MB21D1Q8N884 522 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 PUS7LQ9H0K6 701 aaKnown RBP16.34■□□□□ 0.21
DCLK1-207ENST00000486239 HOXC10Q9NYD6 342 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 ROBO3Q96MS0 1386 aa16.34■□□□□ 0.21
DCLK1-207ENST00000486239 A0A0G2JMZ2 1700 aa16.33■□□□□ 0.21
DCLK1-207ENST00000486239 PLXNB2O15031 1838 aa16.33■□□□□ 0.21
DCLK1-207ENST00000486239 MYCP01106 439 aaPredicted RBP16.33■□□□□ 0.2
DCLK1-207ENST00000486239 GUCY1A2P33402 732 aa16.33■□□□□ 0.2
DCLK1-207ENST00000486239 RGS2P41220 211 aa16.33■□□□□ 0.2
DCLK1-207ENST00000486239 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.2
DCLK1-207ENST00000486239 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
DCLK1-207ENST00000486239 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.2
DCLK1-207ENST00000486239 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
DCLK1-207ENST00000486239 KANSL2Q9H9L4 492 aa16.33■□□□□ 0.2
DCLK1-207ENST00000486239 PAK6Q9NQU5 681 aaPredicted RBP16.33■□□□□ 0.2
DCLK1-207ENST00000486239 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
DCLK1-207ENST00000486239 PRKAB2O43741 272 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 SGPL1O95470 568 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 ELNP15502 786 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 CDK8P49336 464 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 ACER1Q8TDN7 264 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 GREB1LQ9C091 1923 aaPredicted RBP16.32■□□□□ 0.2
DCLK1-207ENST00000486239 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
DCLK1-207ENST00000486239 TXNRD2Q9NNW7 524 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 GJD2Q9UKL4 321 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 ZNF236Q9UL36 1845 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
DCLK1-207ENST00000486239 RPTORQ8N122 1335 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 WDR46O15213 610 aaKnown RBP16.31■□□□□ 0.2
DCLK1-207ENST00000486239 GPAA1O43292 621 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 CYP2D6P10635 497 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 COG2Q14746 738 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 GPR142Q7Z601 462 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 ANKLE1Q8NAG6 615 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 APBA2Q99767 749 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 FSD1Q9BTV5 496 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 UNC93B1Q9H1C4 597 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 HMX1Q9NP08 348 aaPredicted RBP16.31■□□□□ 0.2
DCLK1-207ENST00000486239 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
DCLK1-207ENST00000486239 SPDYE16A6NNV3 312 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms