RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 DNAJC18Q9H819 358 aa15.52■□□□□ 0.08
SSR4-211ENST00000486204 DCP1AQ9NPI6 582 aaPredicted RBP15.52■□□□□ 0.08
SSR4-211ENST00000486204 SAP30BPQ9UHR5 308 aaKnown RBP15.52■□□□□ 0.08
SSR4-211ENST00000486204 GPAA1O43292 621 aa15.51■□□□□ 0.07
SSR4-211ENST00000486204 INHAP05111 366 aa15.51■□□□□ 0.07
SSR4-211ENST00000486204 EVX2Q03828 476 aa15.51■□□□□ 0.07
SSR4-211ENST00000486204 LRRFIP1Q32MZ4 808 aaKnown RBP15.51■□□□□ 0.07
SSR4-211ENST00000486204 TICAM2Q86XR7 235 aa15.51■□□□□ 0.07
SSR4-211ENST00000486204 CRISPLD2Q9H0B8 497 aa15.51■□□□□ 0.07
SSR4-211ENST00000486204 MYH4Q9Y623 1939 aa15.51■□□□□ 0.07
SSR4-211ENST00000486204 TRIM6-TRIM34B2RNG4 842 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 BCRP11274 1271 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 ELNP15502 786 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 SYN1P17600 705 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 MAGEA10P43363 369 aaPredicted RBP15.5■□□□□ 0.07
SSR4-211ENST00000486204 FLT3LGP49771 235 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 NOL9Q5SY16 702 aaKnown RBP15.5■□□□□ 0.07
SSR4-211ENST00000486204 DIS3LQ8TF46 1054 aaKnown RBP15.5■□□□□ 0.07
SSR4-211ENST00000486204 RILPL2Q969X0 211 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 PAK6Q9NQU5 681 aaPredicted RBP15.5■□□□□ 0.07
SSR4-211ENST00000486204 ATP8A2Q9NTI2 1148 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 PI4KBQ9UBF8 816 aa15.5■□□□□ 0.07
SSR4-211ENST00000486204 RPTORQ8N122 1335 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 A0A0D9SFI3 127 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 GSG1L2A8MUP6 293 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 FOXP2O15409 715 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 RRP1BQ14684 758 aaKnown RBP15.49■□□□□ 0.07
SSR4-211ENST00000486204 PXYLP1Q8TE99 480 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 FAM227BQ96M60 508 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 UBE2OQ9C0C9 1292 aaKnown RBP15.49■□□□□ 0.07
SSR4-211ENST00000486204 EHD4Q9H223 541 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 EPB41L4AQ9HCS5 686 aaPredicted RBP15.49■□□□□ 0.07
SSR4-211ENST00000486204 HERC5Q9UII4 1024 aaKnown RBP15.49■□□□□ 0.07
SSR4-211ENST00000486204 SLC4A4Q9Y6R1 1079 aa15.49■□□□□ 0.07
SSR4-211ENST00000486204 CYP2D6P10635 497 aa15.48■□□□□ 0.07
SSR4-211ENST00000486204 SDSP20132 328 aa15.48■□□□□ 0.07
SSR4-211ENST00000486204 PLCD1P51178 756 aa15.48■□□□□ 0.07
SSR4-211ENST00000486204 NMIQ13287 307 aaPredicted RBP15.48■□□□□ 0.07
SSR4-211ENST00000486204 CCDC129Q6ZRS4 1044 aa15.48■□□□□ 0.07
SSR4-211ENST00000486204 PARK7Q99497 189 aaKnown RBP15.48■□□□□ 0.07
SSR4-211ENST00000486204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSR4-211ENST00000486204 MCM9Q9NXL9 1143 aa15.48■□□□□ 0.07
SSR4-211ENST00000486204 PPP4R2Q9NY27 417 aa15.48■□□□□ 0.07
SSR4-211ENST00000486204 VCANP13611 3396 aa15.48■□□□□ 0.07
SSR4-211ENST00000486204 PARP14Q460N5 1801 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 SMIM22K7EJ46 135 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 HLA-DOAP06340 250 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 CYP2C8P10632 490 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 GABPAQ06546 454 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 MOGSQ13724 837 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 TTC6Q86TZ1 520 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 FOXP4Q8IVH2 680 aaPredicted RBP15.47■□□□□ 0.07
SSR4-211ENST00000486204 SCYL3Q8IZE3 742 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 GUCD1Q96NT3 240 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 KCNH4Q9UQ05 1017 aa15.47■□□□□ 0.07
SSR4-211ENST00000486204 CYP2D7A0A087X1C5 515 aa15.46■□□□□ 0.07
SSR4-211ENST00000486204 CTNND1O60716 968 aaKnown RBP15.46■□□□□ 0.07
SSR4-211ENST00000486204 IRF5Q13568 498 aa15.46■□□□□ 0.07
SSR4-211ENST00000486204 GIMAP6Q6P9H5 292 aa15.46■□□□□ 0.07
SSR4-211ENST00000486204 ZNF589Q86UQ0 364 aaPredicted RBP15.46■□□□□ 0.07
SSR4-211ENST00000486204 ANKLE1Q8NAG6 615 aa15.46■□□□□ 0.07
SSR4-211ENST00000486204 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.46■□□□□ 0.07
SSR4-211ENST00000486204 SERPINB13Q9UIV8 391 aa15.46■□□□□ 0.07
SSR4-211ENST00000486204 ROBO3Q96MS0 1386 aa15.46■□□□□ 0.07
SSR4-211ENST00000486204 USP17L12C9JPN9 530 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 USP17L21D6R901 530 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 POTEB2H3BUK9 544 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 TNPO2O14787 897 aaKnown RBP15.45■□□□□ 0.06
SSR4-211ENST00000486204 POLR3DP05423 398 aaPredicted RBP15.45■□□□□ 0.06
SSR4-211ENST00000486204 GNAT2P19087 354 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 SHMT1P34896 483 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 CAP2P40123 477 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 JAG1P78504 1218 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 C12orf60Q5U649 245 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 FAM109BQ6ICB4 259 aaPredicted RBP15.45■□□□□ 0.06
SSR4-211ENST00000486204 GPAT2Q6NUI2 795 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 TATDN1Q6P1N9 297 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 CTR9Q6PD62 1173 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 NBPF3Q9H094 633 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 TAOK2Q9UL54 1235 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 ALPK3Q96L96 1907 aa15.45■□□□□ 0.06
SSR4-211ENST00000486204 PATL2C9JE40 543 aaKnown RBP15.44■□□□□ 0.06
SSR4-211ENST00000486204 PTPRAP18433 802 aa15.44■□□□□ 0.06
SSR4-211ENST00000486204 SHROOM1Q2M3G4 852 aaPredicted RBP15.44■□□□□ 0.06
SSR4-211ENST00000486204 MCMDC2Q4G0Z9 681 aa15.44■□□□□ 0.06
SSR4-211ENST00000486204 SBK1Q52WX2 424 aa15.44■□□□□ 0.06
SSR4-211ENST00000486204 VPS53Q5VIR6 699 aa15.44■□□□□ 0.06
SSR4-211ENST00000486204 IFNL3Q8IZI9 196 aa15.44■□□□□ 0.06
SSR4-211ENST00000486204 CRACR2BQ8N4Y2 399 aaPredicted RBP15.44■□□□□ 0.06
SSR4-211ENST00000486204 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.44■□□□□ 0.06
SSR4-211ENST00000486204 IL25Q9H293 177 aa15.44■□□□□ 0.06
SSR4-211ENST00000486204 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
SSR4-211ENST00000486204 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
SSR4-211ENST00000486204 CCDC84Q86UT8 332 aaPredicted RBP15.43■□□□□ 0.06
SSR4-211ENST00000486204 SLC44A5Q8NCS7 719 aa15.43■□□□□ 0.06
SSR4-211ENST00000486204 DYNLL2Q96FJ2 89 aa15.43■□□□□ 0.06
SSR4-211ENST00000486204 FAM161BQ96MY7 647 aa15.43■□□□□ 0.06
SSR4-211ENST00000486204 DIAPH3Q9NSV4 1193 aa15.43■□□□□ 0.06
SSR4-211ENST00000486204 SPTBN5Q9NRC6 3674 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms