RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 ZNF384Q8TF68 577 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 TRERF1Q96PN7 1200 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 CDC5LQ99459 802 aaKnown RBP20.01■□□□□ 0.79
TNXB-205ENST00000486148 SAMSN1Q9NSI8 373 aaKnown RBP20.01■□□□□ 0.79
TNXB-205ENST00000486148 RREB1Q92766 1687 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 DUOX1Q9NRD9 1551 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 TUBB4AP04350 444 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 AKAP17AQ02040 695 aaKnown RBP20.01■□□□□ 0.79
TNXB-205ENST00000486148 SPATA20Q8TB22 786 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 EPSTI1Q96J88 318 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 PHF20Q9BVI0 1012 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 PHLPP2Q6ZVD8 1323 aa20.01■□□□□ 0.79
TNXB-205ENST00000486148 TRIM75PA6NK02 468 aa20■□□□□ 0.79
TNXB-205ENST00000486148 MARCH10Q8NA82 808 aaPredicted RBP20■□□□□ 0.79
TNXB-205ENST00000486148 DHX58Q96C10 678 aa20■□□□□ 0.79
TNXB-205ENST00000486148 V9GY48 417 aaPredicted RBP20■□□□□ 0.79
TNXB-205ENST00000486148 ERFEQ4G0M1 354 aa20■□□□□ 0.79
TNXB-205ENST00000486148 NOM1Q5C9Z4 860 aaKnown RBP20■□□□□ 0.79
TNXB-205ENST00000486148 TRIML1Q8N9V2 468 aa20■□□□□ 0.79
TNXB-205ENST00000486148 DACH1Q9UI36 760 aa20■□□□□ 0.79
TNXB-205ENST00000486148 KRT2P35908 639 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 ADKP55263 362 aaKnown RBP19.99■□□□□ 0.79
TNXB-205ENST00000486148 EVX2Q03828 476 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 IFIT1BQ5T764 474 aaKnown RBP19.99■□□□□ 0.79
TNXB-205ENST00000486148 ANKRD18AQ8IVF6 992 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 GNL3LQ9NVN8 582 aaKnown RBP19.99■□□□□ 0.79
TNXB-205ENST00000486148 ZNF446Q9NWS9 450 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 AATFQ9NY61 560 aaKnown RBP eCLIP19.99■□□□□ 0.79
TNXB-205ENST00000486148 ARHGAP6O43182 974 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 PRPF3O43395 683 aaKnown RBP19.99■□□□□ 0.79
TNXB-205ENST00000486148 CASP1P29466 404 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 PPP2R5BQ15173 497 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 SPECC1LQ69YQ0 1117 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 KANK3Q6NY19 840 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 TC2NQ8N9U0 490 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 BAG1Q99933 345 aaPredicted RBP19.99■□□□□ 0.79
TNXB-205ENST00000486148 PPP2R2CQ9Y2T4 447 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 VWA3AA6NCI4 1184 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 PLCD1P51178 756 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 FCHSD1Q86WN1 690 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 TRIM34Q9BYJ4 488 aa19.99■□□□□ 0.79
TNXB-205ENST00000486148 A0A1B0GUL6 1792 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 XBP1P17861 261 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 AFMP43652 599 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 TROAPQ12815 778 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 UBE4AQ14139 1066 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 CATIPQ7Z7H3 387 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 BRIP1Q9BX63 1249 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 CTR9Q6PD62 1173 aa19.98■□□□□ 0.79
TNXB-205ENST00000486148 NUTM2AQ8IVF1 878 aaPredicted RBP19.98■□□□□ 0.79
TNXB-205ENST00000486148 SYMPKQ92797 1274 aaKnown RBP19.98■□□□□ 0.79
TNXB-205ENST00000486148 FAM84BQ96KN1 310 aaPredicted RBP19.98■□□□□ 0.79
TNXB-205ENST00000486148 SPATA31A1Q5TZJ5 1347 aa19.97■□□□□ 0.79
TNXB-205ENST00000486148 MINPP1Q9UNW1 487 aa19.97■□□□□ 0.79
TNXB-205ENST00000486148 ZSCAN12O43309 604 aa19.97■□□□□ 0.79
TNXB-205ENST00000486148 CD44P16070 742 aaKnown RBP19.97■□□□□ 0.79
TNXB-205ENST00000486148 NPY5RQ15761 445 aa19.97■□□□□ 0.79
TNXB-205ENST00000486148 TOGARAM2Q6ZUX3 1019 aa19.97■□□□□ 0.79
TNXB-205ENST00000486148 FAM177A1Q8N128 213 aaPredicted RBP19.97■□□□□ 0.79
TNXB-205ENST00000486148 H2AFXP16104 143 aaPredicted RBP19.96■□□□□ 0.79
TNXB-205ENST00000486148 ERCC5P28715 1186 aaPredicted RBP19.96■□□□□ 0.79
TNXB-205ENST00000486148 CYP2C19P33261 490 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 HNRNPH2P55795 449 aaKnown RBP19.96■□□□□ 0.79
TNXB-205ENST00000486148 NR1I3Q14994 352 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 ZNF174Q15697 407 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 CAVIN4Q5BKX8 364 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 SH3RF1Q7Z6J0 888 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 PAGE5Q96GU1 130 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 NOL10Q9BSC4 688 aaKnown RBP19.96■□□□□ 0.79
TNXB-205ENST00000486148 BSDC1Q9NW68 430 aaPredicted RBP19.96■□□□□ 0.79
TNXB-205ENST00000486148 USP17L12C9JPN9 530 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 USP17L21D6R901 530 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 FGRP09769 529 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 KLRK1P26718 216 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 IQCA1Q86XH1 822 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 TNFRSF25Q93038 417 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 CDCA7Q9BWT1 371 aaPredicted RBP19.96■□□□□ 0.79
TNXB-205ENST00000486148 ZNF652Q9Y2D9 606 aa19.96■□□□□ 0.79
TNXB-205ENST00000486148 NMT2O60551 498 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 URI1O94763 535 aaPredicted RBP19.95■□□□□ 0.78
TNXB-205ENST00000486148 ADAMTS2O95450 1211 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 TMTC3Q6ZXV5 915 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 CELF1Q92879 486 aaKnown RBP19.95■□□□□ 0.78
TNXB-205ENST00000486148 RBM28Q9NW13 759 aaKnown RBP19.95■□□□□ 0.78
TNXB-205ENST00000486148 PARP3Q9Y6F1 533 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 SCN7AQ01118 1682 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 STX10O60499 249 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 STX17P56962 302 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 SF3B3Q15393 1217 aaKnown RBP19.95■□□□□ 0.78
TNXB-205ENST00000486148 KLHL10Q6JEL2 608 aa19.95■□□□□ 0.78
TNXB-205ENST00000486148 A0A1B0GTH6 734 aa19.94■□□□□ 0.78
TNXB-205ENST00000486148 KCNQ2O43526 872 aa19.94■□□□□ 0.78
TNXB-205ENST00000486148 ARHGAP29Q52LW3 1261 aa19.94■□□□□ 0.78
TNXB-205ENST00000486148 APTXQ7Z2E3 356 aaKnown RBP19.94■□□□□ 0.78
TNXB-205ENST00000486148 SMYD4Q8IYR2 804 aaPredicted RBP19.94■□□□□ 0.78
TNXB-205ENST00000486148 FEZ2Q9UHY8 353 aaPredicted RBP19.94■□□□□ 0.78
TNXB-205ENST00000486148 CNTNAP5Q8WYK1 1306 aa19.94■□□□□ 0.78
TNXB-205ENST00000486148 TEX33O43247 280 aa19.94■□□□□ 0.78
TNXB-205ENST00000486148 SRBD1Q8N5C6 995 aaKnown RBP19.94■□□□□ 0.78
TNXB-205ENST00000486148 COL22A1Q8NFW1 1626 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms