RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 USP17L13C9JLJ4 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 USP17L11C9JVI0 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 USP17L18D6R9N7 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 USP17L22D6RA61 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 USP17L17D6RBQ6 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 USP17L19D6RCP7 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 USP17L20D6RJB6 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 ATP5JP18859 108 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 CYP2B6P20813 491 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 GABPAQ06546 454 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 USP17L24Q0WX57 530 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 PDE3AQ14432 1141 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 LCORLQ8N3X6 602 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 SDR42E1Q8WUS8 393 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 SOCS4Q8WXH5 440 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 KIAA1683Q9H0B3 1180 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 CRISPLD2Q9H0B8 497 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 HMX1Q9NP08 348 aaPredicted RBP20.74■□□□□ 0.91
SMC4-216ENST00000485645 RPTORQ8N122 1335 aa20.74■□□□□ 0.91
SMC4-216ENST00000485645 NAV1Q8NEY1 1877 aa20.73■□□□□ 0.91
SMC4-216ENST00000485645 ACER1Q8TDN7 264 aa20.73■□□□□ 0.91
SMC4-216ENST00000485645 DCP1AQ9NPI6 582 aaPredicted RBP20.73■□□□□ 0.91
SMC4-216ENST00000485645 NR2E3Q9Y5X4 410 aa20.73■□□□□ 0.91
SMC4-216ENST00000485645 DDX60LQ5H9U9 1706 aaKnown RBP20.73■□□□□ 0.91
SMC4-216ENST00000485645 PLXNB2O15031 1838 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 XRCC5P13010 732 aaKnown RBP20.72■□□□□ 0.91
SMC4-216ENST00000485645 ADD2P35612 726 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 TRIM32Q13049 653 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 C20orf194Q5TEA3 1177 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 CATSPERGQ6ZRH7 1159 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 TRIB2Q92519 343 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 HAUS7Q99871 368 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.72■□□□□ 0.91
SMC4-216ENST00000485645 PORCNQ9H237 461 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 ARMT1Q9H993 441 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 RABGAP1Q9Y3P9 1069 aa20.72■□□□□ 0.91
SMC4-216ENST00000485645 MPHOSPH10O00566 681 aaKnown RBP20.71■□□□□ 0.91
SMC4-216ENST00000485645 VCAM1P19320 739 aa20.71■□□□□ 0.91
SMC4-216ENST00000485645 GUCY1A2P33402 732 aa20.71■□□□□ 0.91
SMC4-216ENST00000485645 SEPT2Q15019 361 aa20.71■□□□□ 0.91
SMC4-216ENST00000485645 POTEEQ6S8J3 1075 aa20.71■□□□□ 0.91
SMC4-216ENST00000485645 GPR142Q7Z601 462 aa20.71■□□□□ 0.91
SMC4-216ENST00000485645 TRMT44Q8IYL2 757 aaKnown RBP20.71■□□□□ 0.91
SMC4-216ENST00000485645 CWC22Q9HCG8 908 aaKnown RBP20.71■□□□□ 0.91
SMC4-216ENST00000485645 CCNA1P78396 465 aa20.7■□□□□ 0.9
SMC4-216ENST00000485645 EVX2Q03828 476 aa20.7■□□□□ 0.9
SMC4-216ENST00000485645 CHRDL2Q6WN34 429 aa20.7■□□□□ 0.9
SMC4-216ENST00000485645 PLEKHH3Q7Z736 793 aa20.7■□□□□ 0.9
SMC4-216ENST00000485645 PAWRQ96IZ0 340 aaKnown RBP20.7■□□□□ 0.9
SMC4-216ENST00000485645 SWAP70Q9UH65 585 aa20.7■□□□□ 0.9
SMC4-216ENST00000485645 EVI5O60447 810 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 MBD4O95243 580 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 CYP2D6P10635 497 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 RGS2P41220 211 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 FXR1P51114 621 aaKnown RBP eCLIP20.69■□□□□ 0.9
SMC4-216ENST00000485645 SLFNL1Q499Z3 407 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 NECAB2Q7Z6G3 386 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 ANKLE1Q8NAG6 615 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 USP6NLQ92738 828 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 RPAP3Q9H6T3 665 aaPredicted RBP20.69■□□□□ 0.9
SMC4-216ENST00000485645 ATP8A2Q9NTI2 1148 aa20.69■□□□□ 0.9
SMC4-216ENST00000485645 PRKAB2O43741 272 aa20.68■□□□□ 0.9
SMC4-216ENST00000485645 CNMDO75829 334 aa20.68■□□□□ 0.9
SMC4-216ENST00000485645 PRKAR2AP13861 404 aaKnown RBP20.68■□□□□ 0.9
SMC4-216ENST00000485645 ZKSCAN1P17029 563 aaPredicted RBP20.68■□□□□ 0.9
SMC4-216ENST00000485645 MORN1Q5T089 497 aa20.68■□□□□ 0.9
SMC4-216ENST00000485645 LBX2Q6XYB7 198 aa20.68■□□□□ 0.9
SMC4-216ENST00000485645 TRIOBPQ9H2D6 2365 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 SMARCA5O60264 1052 aaPredicted RBP20.67■□□□□ 0.9
SMC4-216ENST00000485645 GLRX3O76003 335 aaKnown RBP20.67■□□□□ 0.9
SMC4-216ENST00000485645 UBE3CQ15386 1083 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 MAP3K21Q5TCX8 1036 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 ZSCAN25Q6NSZ9 544 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 TMEM179Q6ZVK1 233 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 AMOTL1Q8IY63 956 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 SLC44A5Q8NCS7 719 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 DYNLL2Q96FJ2 89 aa20.67■□□□□ 0.9
SMC4-216ENST00000485645 A0A1W2PRG0 241 aa20.66■□□□□ 0.9
SMC4-216ENST00000485645 SPDYE16A6NNV3 312 aaPredicted RBP20.66■□□□□ 0.9
SMC4-216ENST00000485645 WDR78Q5VTH9 848 aa20.66■□□□□ 0.9
SMC4-216ENST00000485645 DIS3LQ8TF46 1054 aaKnown RBP20.66■□□□□ 0.9
SMC4-216ENST00000485645 DDRGK1Q96HY6 314 aa20.66■□□□□ 0.9
SMC4-216ENST00000485645 APBA2Q99767 749 aa20.66■□□□□ 0.9
SMC4-216ENST00000485645 CACNB2Q08289 660 aaPredicted RBP20.65■□□□□ 0.9
SMC4-216ENST00000485645 MAP2K5Q13163 448 aa20.65■□□□□ 0.9
SMC4-216ENST00000485645 CCL14Q16627 93 aa20.65■□□□□ 0.9
SMC4-216ENST00000485645 NBPF3Q9H094 633 aa20.65■□□□□ 0.9
SMC4-216ENST00000485645 HOXC10Q9NYD6 342 aa20.65■□□□□ 0.9
SMC4-216ENST00000485645 BTBD7Q9P203 1132 aa20.65■□□□□ 0.9
SMC4-216ENST00000485645 RBM27Q9P2N5 1060 aaKnown RBP20.65■□□□□ 0.9
SMC4-216ENST00000485645 OGDHLQ9ULD0 1010 aa20.65■□□□□ 0.9
SMC4-216ENST00000485645 USP17L12C9JPN9 530 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 USP17L21D6R901 530 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 CHGBP05060 677 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 COG2Q14746 738 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 C12orf60Q5U649 245 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 CCDC17Q96LX7 622 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 ARHGEF10LQ9HCE6 1279 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 ECHDC1Q9NTX5 307 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms