RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 LONRF2Q1L5Z9 754 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 C2orf27AQ580R0 203 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 PRAMEF13Q5VWM6 474 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 PODNQ7Z5L7 613 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 HOMER1Q86YM7 354 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.95□□□□□ -1.46
FN1-222ENST00000485567 SMARCC1Q92922 1105 aaPredicted RBP5.95□□□□□ -1.46
FN1-222ENST00000485567 CEP41Q9BYV8 373 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 ACSS3Q9H6R3 686 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 SSU72Q9NP77 194 aaKnown RBP5.95□□□□□ -1.46
FN1-222ENST00000485567 FAM105AQ9NUU6 356 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 KDM2BQ8NHM5 1336 aa5.95□□□□□ -1.46
FN1-222ENST00000485567 IQCA1LA6NCM1 817 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 SUSD5O60279 629 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 CDC45O75419 566 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 UBOX5O94941 541 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 NAT2P11245 290 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 NRG1Q02297 640 aaPredicted RBP5.94□□□□□ -1.46
FN1-222ENST00000485567 SSRP1Q08945 709 aaKnown RBP5.94□□□□□ -1.46
FN1-222ENST00000485567 ZC3H12BQ5HYM0 836 aaKnown RBP5.94□□□□□ -1.46
FN1-222ENST00000485567 SPATC1Q76KD6 591 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 UBE3DQ7Z6J8 389 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 TMEM192Q8IY95 271 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 SGSM3Q96HU1 749 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 NACC1Q96RE7 527 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 KANSL2Q9H9L4 492 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 FANCLQ9NW38 375 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 PCDHB10Q9UN67 800 aa5.94□□□□□ -1.46
FN1-222ENST00000485567 ESYT3A0FGR9 886 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
FN1-222ENST00000485567 CLEC3AO75596 197 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 SQSTM1Q13501 440 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 GRIK4Q16099 956 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 SLC10A6Q3KNW5 377 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 ANKRD39Q53RE8 183 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 SHISA2Q6UWI4 295 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 C16orf86Q6ZW13 317 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 ARMCX6Q7L4S7 300 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 KIAA0907Q7Z7F0 614 aaPredicted RBP5.93□□□□□ -1.46
FN1-222ENST00000485567 LRRC47Q8N1G4 583 aaKnown RBP5.93□□□□□ -1.46
FN1-222ENST00000485567 AGGF1Q8N302 714 aaeCLIP5.93□□□□□ -1.46
FN1-222ENST00000485567 SYNPOQ8N3V7 929 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 BAHD1Q8TBE0 780 aaPredicted RBP5.93□□□□□ -1.46
FN1-222ENST00000485567 PPP1R13LQ8WUF5 828 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 SLC6A18Q96N87 628 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 SPATA9Q9BWV2 254 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 PFDN2Q9UHV9 154 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 CEP131Q9UPN4 1083 aa5.93□□□□□ -1.46
FN1-222ENST00000485567 CCDC163A0A0D9SF12 145 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 ANKRD34BA5PLL1 514 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 FAM86C2PA6NEL3 165 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 DIAPH1O60610 1272 aaKnown RBP5.92□□□□□ -1.46
FN1-222ENST00000485567 ALX3O95076 343 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
FN1-222ENST00000485567 PREPP48147 710 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 USP11P51784 963 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 RNF187Q5TA31 235 aaPredicted RBP5.92□□□□□ -1.46
FN1-222ENST00000485567 ZSWIM2Q8NEG5 633 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 EZH1Q92800 747 aaPredicted RBP5.92□□□□□ -1.46
FN1-222ENST00000485567 FAM46AQ96IP4 442 aaKnown RBP5.92□□□□□ -1.46
FN1-222ENST00000485567 APBA2Q99767 749 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 DPH2Q9BQC3 489 aaPredicted RBP5.92□□□□□ -1.46
FN1-222ENST00000485567 YIPF2Q9BWQ6 316 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 SUSD2Q9UGT4 822 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 USP21Q9UK80 565 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 CNTNAP5Q8WYK1 1306 aa5.92□□□□□ -1.46
FN1-222ENST00000485567 AGRPO00253 132 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 APBA3O96018 575 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 UVSSAQ2YD98 709 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 CDPF1Q6NVV7 123 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 ALYREFQ86V81 257 aaKnown RBP5.91□□□□□ -1.46
FN1-222ENST00000485567 PPFIBP1Q86W92 1011 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 ANKRD13AQ8IZ07 590 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 ZBTB38Q8NAP3 1195 aaPredicted RBP5.91□□□□□ -1.46
FN1-222ENST00000485567 DNAJB8Q8NHS0 232 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 WFDC12Q8WWY7 111 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 VWCEQ96DN2 955 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 PSMG3-AS1Q96PY0 264 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 SLC26A8Q96RN1 970 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 BRINP2Q9C0B6 783 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 SLKQ9H2G2 1235 aaPredicted RBP5.91□□□□□ -1.46
FN1-222ENST00000485567 ADAMTS8Q9UP79 889 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 LEMD3Q9Y2U8 911 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 PRKAB1Q9Y478 270 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 PTCH2Q9Y6C5 1203 aa5.91□□□□□ -1.46
FN1-222ENST00000485567 COL17A1Q9UMD9 1497 aaPredicted RBP5.9□□□□□ -1.46
FN1-222ENST00000485567 GAS2O43903 313 aaKnown RBP5.9□□□□□ -1.46
FN1-222ENST00000485567 ADCY3O60266 1144 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 FAM153BP0C7A2 387 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 GLB1P16278 677 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 NOS3P29474 1203 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 RNF4P78317 190 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 MAP7Q14244 749 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 ADGRE1Q14246 886 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 TCEA2Q15560 299 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 TAF7LQ5H9L4 462 aa5.9□□□□□ -1.46
FN1-222ENST00000485567 NBPF12Q5TAG4 269 aaPredicted RBP5.9□□□□□ -1.46
FN1-222ENST00000485567 HEATR6Q6AI08 1181 aaKnown RBP5.9□□□□□ -1.46
FN1-222ENST00000485567 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.9□□□□□ -1.46
FN1-222ENST00000485567 SCARF2Q96GP6 870 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms