RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 C12orf42Q96LP6 360 aa21.18■□□□□ 0.98
SREBF1-213ENST00000485080 KIAA1683Q9H0B3 1180 aa21.18■□□□□ 0.98
SREBF1-213ENST00000485080 MKNK2Q9HBH9 465 aa21.18■□□□□ 0.98
SREBF1-213ENST00000485080 FGRP09769 529 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 USP14P54578 494 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 HMGCS2P54868 508 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 PDE4BQ07343 736 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 MTMR2Q13614 643 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 USP17L2Q6R6M4 530 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 GADL1Q6ZQY3 521 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 RUFY2Q8WXA3 655 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 DSCC1Q9BVC3 393 aa21.17■□□□□ 0.98
SREBF1-213ENST00000485080 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
SREBF1-213ENST00000485080 MPHOSPH10O00566 681 aaKnown RBP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 HOXA7P31268 230 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 PABPC4Q13310 644 aaKnown RBP eCLIP21.16■□□□□ 0.984e-7■■□□□ 13
SREBF1-213ENST00000485080 COL13A1Q5TAT6 717 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 ZNF296Q8WUU4 475 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 PARK7Q99497 189 aaKnown RBP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 KANSL2Q9H9L4 492 aa21.16■□□□□ 0.98
SREBF1-213ENST00000485080 TMOD4Q9NZQ9 345 aa21.16■□□□□ 0.98
SREBF1-213ENST00000485080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 GREB1LQ9C091 1923 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-213ENST00000485080 FKTNO75072 461 aa21.15■□□□□ 0.98
SREBF1-213ENST00000485080 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
SREBF1-213ENST00000485080 ACER1Q8TDN7 264 aa21.15■□□□□ 0.98
SREBF1-213ENST00000485080 EMILIN3Q9NT22 766 aa21.15■□□□□ 0.98
SREBF1-213ENST00000485080 PLIN4Q96Q06 1357 aa21.14■□□□□ 0.98
SREBF1-213ENST00000485080 PCP11498 1178 aaKnown RBP21.14■□□□□ 0.97
SREBF1-213ENST00000485080 TREML2Q5T2D2 321 aa21.14■□□□□ 0.97
SREBF1-213ENST00000485080 C17orf99Q6UX52 265 aa21.14■□□□□ 0.97
SREBF1-213ENST00000485080 ZNF444Q8N0Y2 327 aaPredicted RBP21.14■□□□□ 0.97
SREBF1-213ENST00000485080 PNMA3Q9UL41 463 aa21.14■□□□□ 0.97
SREBF1-213ENST00000485080 IGKV6D-41A0A0C4DH26 115 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 A0A1W2PRG0 241 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 SGSM2O43147 1006 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 ORC4O43929 436 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 NT5C2P49902 561 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 ICA1Q05084 483 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 IL25Q9H293 177 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 SH2D4AQ9H788 454 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 TMX2Q9Y320 296 aa21.13■□□□□ 0.97
SREBF1-213ENST00000485080 SP3Q02447 781 aa21.12■□□□□ 0.97
SREBF1-213ENST00000485080 SKAP1Q86WV1 359 aa21.12■□□□□ 0.97
SREBF1-213ENST00000485080 NEDD1Q8NHV4 660 aa21.12■□□□□ 0.97
SREBF1-213ENST00000485080 FEZ1Q99689 392 aa21.12■□□□□ 0.97
SREBF1-213ENST00000485080 ARHGEF10LQ9HCE6 1279 aa21.12■□□□□ 0.97
SREBF1-213ENST00000485080 CTNNA3Q9UI47 895 aa21.12■□□□□ 0.97
SREBF1-213ENST00000485080 BCRP11274 1271 aa21.11■□□□□ 0.97
SREBF1-213ENST00000485080 DGKZQ13574 1117 aa21.11■□□□□ 0.97
SREBF1-213ENST00000485080 LPAR1Q92633 364 aa21.11■□□□□ 0.97
SREBF1-213ENST00000485080 NYAP2Q9P242 653 aa21.11■□□□□ 0.97
SREBF1-213ENST00000485080 SYNPO2Q9UMS6 1093 aa21.11■□□□□ 0.97
SREBF1-213ENST00000485080 PRDM1O75626 825 aa21.1■□□□□ 0.97
SREBF1-213ENST00000485080 CYP2C8P10632 490 aa21.1■□□□□ 0.97
SREBF1-213ENST00000485080 OSBPP22059 807 aa21.1■□□□□ 0.97
SREBF1-213ENST00000485080 CTDSPL2Q05D32 466 aa21.1■□□□□ 0.97
SREBF1-213ENST00000485080 MKL1Q969V6 931 aa21.1■□□□□ 0.97
SREBF1-213ENST00000485080 ERO1AQ96HE7 468 aa21.1■□□□□ 0.97
SREBF1-213ENST00000485080 ASCC2Q9H1I8 757 aaPredicted RBP21.1■□□□□ 0.97
SREBF1-213ENST00000485080 EEF2P13639 858 aaKnown RBP21.09■□□□□ 0.97
SREBF1-213ENST00000485080 VCAM1P19320 739 aa21.09■□□□□ 0.97
SREBF1-213ENST00000485080 GCLCP48506 637 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-213ENST00000485080 PPP4R3BQ5MIZ7 849 aa21.09■□□□□ 0.97
SREBF1-213ENST00000485080 STK11IPQ8N1F8 1099 aa21.09■□□□□ 0.97
SREBF1-213ENST00000485080 STAG1Q8WVM7 1258 aa21.09■□□□□ 0.97
SREBF1-213ENST00000485080 NBPF3Q9H094 633 aa21.09■□□□□ 0.97
SREBF1-213ENST00000485080 RNF41Q9H4P4 317 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-213ENST00000485080 MTMR4Q9NYA4 1195 aa21.09■□□□□ 0.97
SREBF1-213ENST00000485080 TACC3Q9Y6A5 838 aa21.09■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L15C9J2P7 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L13C9JLJ4 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L11C9JVI0 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L18D6R9N7 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L22D6RA61 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L17D6RBQ6 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L19D6RCP7 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L20D6RJB6 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 ZNF213O14771 459 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 TSPY3P0CV98 308 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 TSPY8P0CW00 308 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 NOVP48745 357 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 TFAP4Q01664 338 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 USP17L24Q0WX57 530 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 AKNAD1Q5T1N1 836 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 CTU1Q7Z7A3 348 aaKnown RBP21.08■□□□□ 0.97
SREBF1-213ENST00000485080 GTF3C2Q8WUA4 911 aaPredicted RBP21.08■□□□□ 0.97
SREBF1-213ENST00000485080 VCPKMTQ9H867 229 aa21.08■□□□□ 0.97
SREBF1-213ENST00000485080 LAMA4Q16363 1823 aa21.07■□□□□ 0.96
SREBF1-213ENST00000485080 ARHGEF6Q15052 776 aa21.07■□□□□ 0.96
SREBF1-213ENST00000485080 PKN2Q16513 984 aaKnown RBP21.07■□□□□ 0.96
SREBF1-213ENST00000485080 CATSPERGQ6ZRH7 1159 aa21.07■□□□□ 0.96
SREBF1-213ENST00000485080 CLEC10AQ8IUN9 316 aa21.07■□□□□ 0.96
SREBF1-213ENST00000485080 SMCR8Q8TEV9 937 aaPredicted RBP21.07■□□□□ 0.96
SREBF1-213ENST00000485080 CEP95Q96GE4 821 aa21.07■□□□□ 0.96
SREBF1-213ENST00000485080 CPA4Q9UI42 421 aa21.07■□□□□ 0.96
SREBF1-213ENST00000485080 HTTP42858 3142 aa21.07■□□□□ 0.96
SREBF1-213ENST00000485080 TTLL1O95922 423 aa21.06■□□□□ 0.96
SREBF1-213ENST00000485080 HAND2P61296 217 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms