RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
VPS8-223ENST00000485024 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.3
VPS8-223ENST00000485024 FITM1A5D6W6 292 aa6.89□□□□□ -1.31
VPS8-223ENST00000485024 NKG7Q16617 165 aa6.89□□□□□ -1.31
VPS8-223ENST00000485024 GAB4Q2WGN9 574 aa6.89□□□□□ -1.31
VPS8-223ENST00000485024 LETMD1Q6P1Q0 360 aa6.89□□□□□ -1.31
VPS8-223ENST00000485024 OXR1Q8N573 874 aa6.89□□□□□ -1.31
VPS8-223ENST00000485024 MATN3O15232 486 aa6.88□□□□□ -1.31
VPS8-223ENST00000485024 FCGRTP55899 365 aa6.88□□□□□ -1.31
VPS8-223ENST00000485024 ZNF507Q8TCN5 953 aa6.88□□□□□ -1.31
VPS8-223ENST00000485024 CBX8Q9HC52 389 aa6.88□□□□□ -1.31
VPS8-223ENST00000485024 SRRDQ9UH36 339 aa6.88□□□□□ -1.31
VPS8-223ENST00000485024 CILPO75339 1184 aa6.87□□□□□ -1.31
VPS8-223ENST00000485024 KIR3DL1P43629 444 aa6.87□□□□□ -1.31
VPS8-223ENST00000485024 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
VPS8-223ENST00000485024 TRAIPQ9BWF2 469 aa6.87□□□□□ -1.31
VPS8-223ENST00000485024 EMILIN2Q9BXX0 1053 aa6.87□□□□□ -1.31
VPS8-223ENST00000485024 GPR160Q9UJ42 338 aa6.87□□□□□ -1.31
VPS8-223ENST00000485024 IRS4O14654 1257 aaPredicted RBP6.86□□□□□ -1.31
VPS8-223ENST00000485024 GRIN3BO60391 1043 aa6.86□□□□□ -1.31
VPS8-223ENST00000485024 TPP2P29144 1249 aaPredicted RBP6.86□□□□□ -1.31
VPS8-223ENST00000485024 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
VPS8-223ENST00000485024 FKBP4Q02790 459 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS8-223ENST00000485024 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
VPS8-223ENST00000485024 TMEFF1Q8IYR6 380 aa6.86□□□□□ -1.31
VPS8-223ENST00000485024 MFSD2AQ8NA29 543 aa6.86□□□□□ -1.31
VPS8-223ENST00000485024 TP53I13Q8NBR0 393 aaPredicted RBP6.86□□□□□ -1.31
VPS8-223ENST00000485024 SORCS2Q96PQ0 1159 aa6.86□□□□□ -1.31
VPS8-223ENST00000485024 DUSP15Q9H1R2 295 aaPredicted RBP6.86□□□□□ -1.31
VPS8-223ENST00000485024 N4BP3O15049 544 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 FSHBP01225 129 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 NEFLP07196 543 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 CAP2P40123 477 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 EGR3Q06889 387 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 ZNF746Q6NUN9 644 aaPredicted RBP6.85□□□□□ -1.31
VPS8-223ENST00000485024 CNTD2Q9H8S5 307 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 EBF1Q9UH73 591 aa6.85□□□□□ -1.31
VPS8-223ENST00000485024 OR14I1A6ND48 311 aa6.84□□□□□ -1.31
VPS8-223ENST00000485024 TRIM37O94972 964 aa6.84□□□□□ -1.31
VPS8-223ENST00000485024 EFEMP2O95967 443 aa6.84□□□□□ -1.31
VPS8-223ENST00000485024 PIWIL2Q8TC59 973 aaKnown RBP6.84□□□□□ -1.31
VPS8-223ENST00000485024 Q96M66 194 aa6.84□□□□□ -1.31
VPS8-223ENST00000485024 MENTQ9BUN1 341 aa6.84□□□□□ -1.31
VPS8-223ENST00000485024 PATL2C9JE40 543 aaKnown RBP6.83□□□□□ -1.32
VPS8-223ENST00000485024 K7ESM1 405 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 BMP6P22004 513 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 SNX17Q15036 470 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 LINC01356Q8N9X3 169 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
VPS8-223ENST00000485024 COX4I2Q96KJ9 171 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 DUSP13Q9UII6 198 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 PALD1Q9ULE6 856 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 PCDHA4Q9UN74 947 aa6.83□□□□□ -1.32
VPS8-223ENST00000485024 PRAMEF27A3QJZ7 478 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 EIF1AYO14602 144 aaKnown RBP6.82□□□□□ -1.32
VPS8-223ENST00000485024 SSFA2P28290 1259 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 ZNF211Q13398 564 aaPredicted RBP6.82□□□□□ -1.32
VPS8-223ENST00000485024 INPP5AQ14642 412 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 ZNF827Q17R98 1081 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 ADGRF1Q5T601 910 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 RASIP1Q5U651 963 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 CNKSR3Q6P9H4 555 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 CDH24Q86UP0 819 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 FAM129CQ86XR2 697 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 XAGE3Q8WTP9 111 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 SCAND2PQ9GZW5 306 aaPredicted RBP6.82□□□□□ -1.32
VPS8-223ENST00000485024 SIRT5Q9NXA8 310 aa6.82□□□□□ -1.32
VPS8-223ENST00000485024 CNOT11Q9UKZ1 510 aaKnown RBP6.82□□□□□ -1.32
VPS8-223ENST00000485024 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
VPS8-223ENST00000485024 NOTOA8MTQ0 251 aa6.81□□□□□ -1.32
VPS8-223ENST00000485024 PRAMEF13Q5VWM6 474 aa6.81□□□□□ -1.32
VPS8-223ENST00000485024 LRFN4Q6PJG9 635 aa6.81□□□□□ -1.32
VPS8-223ENST00000485024 PPP1R13LQ8WUF5 828 aa6.81□□□□□ -1.32
VPS8-223ENST00000485024 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
VPS8-223ENST00000485024 VWCEQ96DN2 955 aa6.81□□□□□ -1.32
VPS8-223ENST00000485024 HRKO00198 91 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 PAGE1O75459 146 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 CYP7A1P22680 504 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 VIPR1P32241 457 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 MAGEA10P43363 369 aaPredicted RBP6.8□□□□□ -1.32
VPS8-223ENST00000485024 RANGAP1P46060 587 aaPredicted RBP6.8□□□□□ -1.32
VPS8-223ENST00000485024 CDR1P51861 262 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 HMGA2P52926 109 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 ADAM17P78536 824 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 SIRT2Q8IXJ6 389 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 PBXIP1Q96AQ6 731 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 PCDHA11Q9Y5I1 949 aa6.8□□□□□ -1.32
VPS8-223ENST00000485024 ZFYVE27Q5T4F4 411 aa6.79□□□□□ -1.32
VPS8-223ENST00000485024 DHX38Q92620 1227 aaKnown RBP6.79□□□□□ -1.32
VPS8-223ENST00000485024 NECAB3Q96P71 396 aaPredicted RBP6.79□□□□□ -1.32
VPS8-223ENST00000485024 ABL1P00519 1130 aa6.78□□□□□ -1.32
VPS8-223ENST00000485024 CST3P01034 146 aaPredicted RBP6.78□□□□□ -1.32
VPS8-223ENST00000485024 XRCC5P13010 732 aaKnown RBP6.78□□□□□ -1.32
VPS8-223ENST00000485024 CHRNEQ04844 493 aa6.78□□□□□ -1.32
VPS8-223ENST00000485024 PI16Q6UXB8 463 aa6.78□□□□□ -1.32
VPS8-223ENST00000485024 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
VPS8-223ENST00000485024 FAM129BQ96TA1 746 aa6.78□□□□□ -1.32
VPS8-223ENST00000485024 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
VPS8-223ENST00000485024 BRPF3Q9ULD4 1205 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms