RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 GABPAQ06546 454 aa16.56■□□□□ 0.24
ITGA4-210ENST00000484404 COA7Q96BR5 231 aa16.56■□□□□ 0.24
ITGA4-210ENST00000484404 GINM1Q9NU53 330 aa16.56■□□□□ 0.24
ITGA4-210ENST00000484404 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
ITGA4-210ENST00000484404 GREB1LQ9C091 1923 aaPredicted RBP16.56■□□□□ 0.24
ITGA4-210ENST00000484404 ALPK3Q96L96 1907 aa16.55■□□□□ 0.24
ITGA4-210ENST00000484404 GCLCP48506 637 aaPredicted RBP16.55■□□□□ 0.24
ITGA4-210ENST00000484404 SLAIN1Q8ND83 568 aa16.55■□□□□ 0.24
ITGA4-210ENST00000484404 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
ITGA4-210ENST00000484404 UNC93B1Q9H1C4 597 aa16.55■□□□□ 0.24
ITGA4-210ENST00000484404 INHAP05111 366 aa16.54■□□□□ 0.24
ITGA4-210ENST00000484404 AKR1B1P15121 316 aa16.54■□□□□ 0.24
ITGA4-210ENST00000484404 HOXA7P31268 230 aaPredicted RBP16.54■□□□□ 0.24
ITGA4-210ENST00000484404 UBXN2AP68543 259 aa16.54■□□□□ 0.24
ITGA4-210ENST00000484404 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
ITGA4-210ENST00000484404 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
ITGA4-210ENST00000484404 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
ITGA4-210ENST00000484404 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
ITGA4-210ENST00000484404 USP17L21D6R901 530 aa16.53■□□□□ 0.24
ITGA4-210ENST00000484404 VCAM1P19320 739 aa16.53■□□□□ 0.24
ITGA4-210ENST00000484404 PRPF38BQ5VTL8 546 aaKnown RBP16.53■□□□□ 0.24
ITGA4-210ENST00000484404 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
ITGA4-210ENST00000484404 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
ITGA4-210ENST00000484404 MORF4L1Q9UBU8 362 aa16.53■□□□□ 0.24
ITGA4-210ENST00000484404 A0A1W2PRG0 241 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 M0R2C6 588 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 TRIM32Q13049 653 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 Q3C1V9 767 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
ITGA4-210ENST00000484404 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 PORCNQ9H237 461 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 RPAP3Q9H6T3 665 aaPredicted RBP16.52■□□□□ 0.24
ITGA4-210ENST00000484404 ATP8A2Q9NTI2 1148 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.24
ITGA4-210ENST00000484404 ZNFX1Q9P2E3 1918 aaKnown RBP16.52■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L15C9J2P7 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L13C9JLJ4 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L11C9JVI0 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L18D6R9N7 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L22D6RA61 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L17D6RBQ6 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L19D6RCP7 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L20D6RJB6 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 CYP2B6P20813 491 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 CDK8P49336 464 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP14P54578 494 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 ERVK-24P63145 666 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 ATP2B2Q01814 1243 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 USP17L24Q0WX57 530 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 C12orf60Q5U649 245 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 WDR78Q5VTH9 848 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 C12orf42Q96LP6 360 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
ITGA4-210ENST00000484404 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
ITGA4-210ENST00000484404 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
ITGA4-210ENST00000484404 CNMDO75829 334 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 IRF5Q13568 498 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 KIAA1755Q5JYT7 1200 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 CCAR1Q8IX12 1150 aaKnown RBP16.5■□□□□ 0.23
ITGA4-210ENST00000484404 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 PI4K2BQ8TCG2 481 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 APPBP2Q92624 585 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 STRBPQ96SI9 672 aaKnown RBP16.5■□□□□ 0.23
ITGA4-210ENST00000484404 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
ITGA4-210ENST00000484404 TANGO6Q9C0B7 1094 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 SWAP70Q9UH65 585 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 PLXNA1Q9UIW2 1896 aa16.5■□□□□ 0.23
ITGA4-210ENST00000484404 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 GPAA1O43292 621 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 MX1P20591 662 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 ICA1Q05084 483 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 TMEM179Q6ZVK1 233 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 DEFB118Q96PH6 123 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 FSD1Q9BTV5 496 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 EPB41L4AQ9HCS5 686 aaPredicted RBP16.49■□□□□ 0.23
ITGA4-210ENST00000484404 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
ITGA4-210ENST00000484404 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
ITGA4-210ENST00000484404 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
ITGA4-210ENST00000484404 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
ITGA4-210ENST00000484404 RAD21O60216 631 aa16.48■□□□□ 0.23
ITGA4-210ENST00000484404 GJB1P08034 283 aa16.48■□□□□ 0.23
ITGA4-210ENST00000484404 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
ITGA4-210ENST00000484404 U2AF1L4Q8WU68 220 aaKnown RBP16.48■□□□□ 0.23
ITGA4-210ENST00000484404 TRIB2Q92519 343 aa16.48■□□□□ 0.23
ITGA4-210ENST00000484404 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
ITGA4-210ENST00000484404 ARPP21Q9UBL0 812 aaPredicted RBP16.48■□□□□ 0.23
ITGA4-210ENST00000484404 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
ITGA4-210ENST00000484404 ERC2O15083 957 aa16.47■□□□□ 0.23
ITGA4-210ENST00000484404 APPP05067 770 aa16.47■□□□□ 0.23
ITGA4-210ENST00000484404 GJA8P48165 433 aa16.47■□□□□ 0.23
ITGA4-210ENST00000484404 TDO2P48775 406 aa16.47■□□□□ 0.23
ITGA4-210ENST00000484404 GPR142Q7Z601 462 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms