RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 SLC15A5A6NIM6 579 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 GH2P01242 217 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 RTP1P59025 263 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 EVX2Q03828 476 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 PDE3AQ14432 1141 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 SH3RF1Q7Z6J0 888 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 TRIM43Q96BQ3 446 aaPredicted RBP10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 LRP2BPQ9P2M1 347 aa10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 SAP30BPQ9UHR5 308 aaKnown RBP10.63□□□□□ -0.71
RTFDC1-208ENST00000484084 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 VCAM1P19320 739 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 EPHB4P54760 987 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 KIAA1755Q5JYT7 1200 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 GJC2Q5T442 439 aaPredicted RBP10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 NAA16Q6N069 864 aaPredicted RBP10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 SLC39A5Q6ZMH5 540 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 KIAA1683Q9H0B3 1180 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 MYH1P12882 1939 aa10.62□□□□□ -0.71
RTFDC1-208ENST00000484084 A0A1W2PRG0 241 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L15C9J2P7 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L13C9JLJ4 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L11C9JVI0 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L18D6R9N7 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L22D6RA61 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L17D6RBQ6 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L19D6RCP7 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L20D6RJB6 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 COBLO75128 1261 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 SHMT1P34896 483 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 RARSP54136 660 aaKnown RBP10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 USP17L24Q0WX57 530 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 ZYXQ15942 572 aaKnown RBP10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 ZNF697Q5TEC3 545 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 GTF3C2Q8WUA4 911 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 MYLIPQ8WY64 445 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 ARHGAP45Q92619 1136 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 BADQ92934 168 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 ZNF512BQ96KM6 892 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 PDLIM7Q9NR12 457 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 PARP14Q460N5 1801 aa10.61□□□□□ -0.71
RTFDC1-208ENST00000484084 XIRP2A4UGR9 3374 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 BAG3O95817 575 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 UQCRFS1P1P0C7P4 283 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 ZAP70P43403 619 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 PLCD1P51178 756 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 SMAD3P84022 425 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 POLA2Q14181 598 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 TRIM60Q495X7 471 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 TNNI3KQ59H18 835 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 C1orf53Q5VUE5 145 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 MFSD14CQ5VZR4 134 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 MAFAQ8NHW3 353 aaPredicted RBP10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 LBHD1Q9BQE6 289 aaPredicted RBP10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 EHD4Q9H223 541 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 GPR108Q9NPR9 543 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 TLR7Q9NYK1 1049 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 FPGT-TNNI3KV9GXZ4 949 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 REV3LO60673 3130 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 CHD9Q3L8U1 2897 aa10.6□□□□□ -0.71
RTFDC1-208ENST00000484084 MSCO60682 206 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 GNAI3P08754 354 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 TRIM27P14373 513 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 PLCG2P16885 1265 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 GABPAQ06546 454 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 PRAMEF19Q5SWL8 479 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 OLFML2BQ68BL8 750 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 CRACR2BQ8N4Y2 399 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 MOV10L1Q9BXT6 1211 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 DBNLQ9UJU6 430 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 HDAC5Q9UQL6 1122 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 ATP11BQ9Y2G3 1177 aa10.59□□□□□ -0.71
RTFDC1-208ENST00000484084 ADORA2AP29274 412 aa10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 CNGA1P29973 690 aa10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 ATP2B2Q01814 1243 aa10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 MIGA1Q8NAN2 632 aa10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 RIOK1Q9BRS2 568 aaKnown RBP10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 RPAP3Q9H6T3 665 aaPredicted RBP10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 SERPINB13Q9UIV8 391 aa10.58□□□□□ -0.72
RTFDC1-208ENST00000484084 TTC28Q96AY4 2481 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 SEPT4O43236 478 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 IGSF3O75054 1194 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 GLRX3O76003 335 aaKnown RBP10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 GNAI2P04899 355 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 CYP7A1P22680 504 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 ADCYAP1R1P41586 468 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 CCNA1P78396 465 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 SEPT2Q15019 361 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 RAB3GAP1Q15042 981 aa10.57□□□□□ -0.72
RTFDC1-208ENST00000484084 LRRC41Q15345 812 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 579.5 ms