RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 MAP2K2P36507 400 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 SUSD4Q5VX71 490 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 CAPN12Q6ZSI9 719 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 TTLL7Q6ZT98 887 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 SAPCD2Q86UD0 394 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 MYO19Q96H55 970 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 GLIS2Q9BZE0 524 aaPredicted RBP7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 ENAMQ9NRM1 1142 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 KCNH4Q9UQ05 1017 aa7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 TNRC18O15417 2968 aaPredicted RBP7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 IBTKQ9P2D0 1353 aaPredicted RBP7.91□□□□□ -1.14
SEMA3D-204ENST00000484038 CA12O43570 354 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 BCRP11274 1271 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 COX20Q5RI15 118 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 IER5Q5VY09 327 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 RAB44Q7Z6P3 723 aaPredicted RBP7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 NEDD1Q8NHV4 660 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 CRAMP1Q96RY5 1269 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 MCOLN1Q9GZU1 580 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 LRFN2Q9ULH4 789 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 ZNRF3Q9ULT6 936 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 USTQ9Y2C2 406 aa7.9□□□□□ -1.14
SEMA3D-204ENST00000484038 HTATSF1O43719 755 aaKnown RBP7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 NTSR2O95665 410 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 NEFMP07197 916 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 EPB42P16452 691 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 RGS19P49795 217 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 GMPSP49915 693 aaPredicted RBP7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 IDH3AP50213 366 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 CXCL9Q07325 125 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 PPP1R42Q7Z4L9 355 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 COL26A1Q96A83 441 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 BCL2L13Q9BXK5 485 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 SAP130Q9H0E3 1048 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 HCN2Q9UL51 889 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 ATP6V0A2Q9Y487 856 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 DLG5Q8TDM6 1919 aa7.89□□□□□ -1.15
SEMA3D-204ENST00000484038 ABCC4O15439 1325 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 NEURL1BA8MQ27 555 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 RAD17O75943 681 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 ARAFP10398 606 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 ADH6P28332 368 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 PPP2R1AP30153 589 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 PCBP4P57723 403 aaKnown RBP7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 SPEM2Q0P670 501 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 GRIN2CQ14957 1233 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 CIAPIN1Q6FI81 312 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 DPP8Q6V1X1 898 aaPredicted RBP7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 RETREG2Q8NC44 543 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 GALNT6Q8NCL4 622 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 SUPT20HQ8NEM7 779 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 PNISRQ8TF01 805 aaKnown RBP7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 THUMPD2Q9BTF0 503 aaKnown RBP7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 DNMT3AQ9Y6K1 912 aaPredicted RBP7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 CDHR2Q9BYE9 1310 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 MICAL2O94851 1124 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 AMPD1P23109 780 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 BRD2P25440 801 aaKnown RBP7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 SCNN1AP37088 669 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 ARSDP51689 593 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 EIF4A1P60842 406 aaKnown RBP7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 PARP10Q53GL7 1025 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 ZNF34Q8IZ26 560 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 TRPM4Q8TD43 1214 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 HHIPL1Q96JK4 782 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 PNMA5Q96PV4 448 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 VPS33BQ9H267 617 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 SEPT3Q9UH03 358 aa7.88□□□□□ -1.15
SEMA3D-204ENST00000484038 CASP8AP2Q9UKL3 1982 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 LAMB2P55268 1798 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 SHTN1A0MZ66 631 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 MARSP56192 900 aaKnown RBP7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 NOGQ13253 232 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 TNIP1Q15025 636 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 ZNF468Q5VIY5 522 aaPredicted RBP7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 CDC37L1Q7L3B6 337 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 SYT9Q86SS6 491 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 BHMTQ93088 406 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 SLC30A3Q99726 388 aa7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 UTP14AQ9BVJ6 771 aaKnown RBP7.87□□□□□ -1.15
SEMA3D-204ENST00000484038 ANKRD36CQ5JPF3 1778 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 OIP5O43482 229 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 HCLS1P14317 486 aaPredicted RBP7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 HUNKP57058 714 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 TBC1D8BQ0IIM8 1120 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 B4GALNT3Q6L9W6 998 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 DLK2Q6UY11 383 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 SLCO4C1Q6ZQN7 724 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 RTFDC1Q9BY42 306 aaPredicted RBP7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 CNOT7Q9UIV1 285 aaKnown RBP7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 MTMR7Q9Y216 660 aa7.86□□□□□ -1.15
SEMA3D-204ENST00000484038 DUOX1Q9NRD9 1551 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 H7C1D1 291 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms