RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ARHGAP10A1A4S6 786 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 KCNK3O14649 394 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 PAK1Q13153 545 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 ABCB6Q9NP58 842 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
COL12A1-207ENST00000483888 BTBD11A6QL63 1104 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 MAGEA1P43355 309 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 CEP19Q96LK0 163 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 SNUPNO95149 360 aaKnown RBP11.29□□□□□ -0.6
COL12A1-207ENST00000483888 CREB3L3Q68CJ9 461 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 IQUBQ8NA54 791 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-207ENST00000483888 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-207ENST00000483888 METTL24Q5JXM2 366 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 JARID2Q92833 1246 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-207ENST00000483888 KCNH3Q9ULD8 1083 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 RSPH3Q86UC2 560 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 ARL10Q8N8L6 244 aa11.29□□□□□ -0.6
COL12A1-207ENST00000483888 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-207ENST00000483888 KRT2P35908 639 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 MAPK8IP1Q9UQF2 711 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 PSME1Q06323 249 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 PLEKHO1Q53GL0 409 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-207ENST00000483888 COQ7Q99807 217 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 TUBB6Q9BUF5 446 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 CAMSAP2Q08AD1 1489 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 RILPL1Q5EBL4 403 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 KRT12Q99456 494 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 ARHGAP4P98171 946 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 IFT122Q9HBG6 1241 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 ETAA1Q9NY74 926 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 TAB2Q9NYJ8 693 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 C2orf54Q08AI8 447 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 WTAPQ15007 396 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 PLEKHM2Q8IWE5 1019 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 SLC35F6Q8N357 371 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 POSTNQ15063 836 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 ZNF653Q96CK0 615 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 TMEM51Q9NW97 253 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-207ENST00000483888 SPAG7O75391 227 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 ST5P78524 1137 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-207ENST00000483888 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
COL12A1-207ENST00000483888 CAND2O75155 1236 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 MAP3K12Q12852 859 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 PDCLQ13371 301 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.6
COL12A1-207ENST00000483888 DPH5Q9H2P9 285 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 STOML1Q9UBI4 398 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 TOP2AP11388 1531 aaKnown RBP11.27□□□□□ -0.6
COL12A1-207ENST00000483888 KRT3P12035 628 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 RAD23BP54727 409 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 DMPKQ09013 629 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 CACTINQ8WUQ7 758 aaKnown RBP11.27□□□□□ -0.6
COL12A1-207ENST00000483888 ANKRD50Q9ULJ7 1429 aa11.27□□□□□ -0.6
COL12A1-207ENST00000483888 CUL5Q93034 780 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 MPHOSPH6Q99547 160 aaKnown RBP11.27□□□□□ -0.61
COL12A1-207ENST00000483888 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
COL12A1-207ENST00000483888 MAPK13O15264 365 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 DDIT3P35638 169 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 CDC37L1Q7L3B6 337 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.61
COL12A1-207ENST00000483888 MMEL1Q495T6 779 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 UHMK1Q8TAS1 419 aaKnown RBP11.27□□□□□ -0.61
COL12A1-207ENST00000483888 SH3GL2Q99962 352 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 TCP1P17987 556 aaKnown RBP11.27□□□□□ -0.61
COL12A1-207ENST00000483888 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 C2CD5Q86YS7 1000 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 CCDC125Q86Z20 511 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 CARD10Q9BWT7 1032 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 FCHSD1Q86WN1 690 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 GDAP1Q8TB36 358 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 NCOA2Q15596 1464 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 SUPT3HO75486 399 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 TNFAIP3P21580 790 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 CHST3Q7LGC8 479 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 EPB41L5Q9HCM4 733 aa11.27□□□□□ -0.61
COL12A1-207ENST00000483888 FAM13AO94988 1023 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 SPATA17Q96L03 361 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 ZPR1O75312 459 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 CSGALNACT2Q8N6G5 542 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 ORC6Q9Y5N6 252 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 CFAP73A6NFT4 308 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 TPP2P29144 1249 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-207ENST00000483888 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms