RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ANP32BQ92688 251 aaKnown RBP20.03■□□□□ 0.8
MRPL28-210ENST00000483764 GTF3C6Q969F1 213 aa20.03■□□□□ 0.8
MRPL28-210ENST00000483764 TEPSINQ96N21 525 aa20.03■□□□□ 0.8
MRPL28-210ENST00000483764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.03■□□□□ 0.8
MRPL28-210ENST00000483764 SLC12A7Q9Y666 1083 aa20.03■□□□□ 0.8
MRPL28-210ENST00000483764 IQCA1LA6NCM1 817 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 GOLGA8BA8MQT2 603 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 TBC1D12O60347 775 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 EPHX2P34913 555 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 ST3GAL1Q11201 340 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 CERKLQ49MI3 558 aaPredicted RBP20.02■□□□□ 0.8
MRPL28-210ENST00000483764 RCSD1Q6JBY9 416 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 USP50Q70EL3 339 aaPredicted RBP20.02■□□□□ 0.8
MRPL28-210ENST00000483764 ANKS1AQ92625 1134 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 CHMP4CQ96CF2 233 aa20.02■□□□□ 0.8
MRPL28-210ENST00000483764 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.02■□□□□ 0.8
MRPL28-210ENST00000483764 PITPNM2Q9BZ72 1349 aa20.02■□□□□ 0.79
MRPL28-210ENST00000483764 ZBTB43O43298 467 aa20.02■□□□□ 0.79
MRPL28-210ENST00000483764 CCT2P78371 535 aaKnown RBP20.02■□□□□ 0.79
MRPL28-210ENST00000483764 SCRN1Q12765 414 aa20.02■□□□□ 0.79
MRPL28-210ENST00000483764 TMEM87AQ8NBN3 555 aa20.02■□□□□ 0.79
MRPL28-210ENST00000483764 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.79
MRPL28-210ENST00000483764 SMC3Q9UQE7 1217 aa20.02■□□□□ 0.79
MRPL28-210ENST00000483764 PLIN4Q96Q06 1357 aa20.01■□□□□ 0.79
MRPL28-210ENST00000483764 PDCP20941 246 aa20.01■□□□□ 0.79
MRPL28-210ENST00000483764 MAP3K10Q02779 954 aa20.01■□□□□ 0.79
MRPL28-210ENST00000483764 MIGA2Q7L4E1 593 aa20.01■□□□□ 0.79
MRPL28-210ENST00000483764 SIPA1L1O43166 1804 aa20.01■□□□□ 0.79
MRPL28-210ENST00000483764 MPHOSPH10O00566 681 aaKnown RBP20■□□□□ 0.79
MRPL28-210ENST00000483764 PKP1Q13835 747 aa20■□□□□ 0.79
MRPL28-210ENST00000483764 CATIPQ7Z7H3 387 aa20■□□□□ 0.79
MRPL28-210ENST00000483764 RAB11FIP4Q86YS3 637 aa20■□□□□ 0.79
MRPL28-210ENST00000483764 ZNF654Q8IZM8 581 aa20■□□□□ 0.79
MRPL28-210ENST00000483764 DCPSQ96C86 337 aaKnown RBP20■□□□□ 0.79
MRPL28-210ENST00000483764 CEP95Q96GE4 821 aa20■□□□□ 0.79
MRPL28-210ENST00000483764 TAF1DQ9H5J8 278 aaPredicted RBP20■□□□□ 0.79
MRPL28-210ENST00000483764 STX8Q9UNK0 236 aa20■□□□□ 0.79
MRPL28-210ENST00000483764 PPP2R3BQ9Y5P8 575 aa20■□□□□ 0.79
MRPL28-210ENST00000483764 IGKV6D-41A0A0C4DH26 115 aa19.99■□□□□ 0.79
MRPL28-210ENST00000483764 POTECB2RU33 542 aa19.99■□□□□ 0.79
MRPL28-210ENST00000483764 NOVP48745 357 aa19.99■□□□□ 0.79
MRPL28-210ENST00000483764 METAP2P50579 478 aaKnown RBP eCLIP19.99■□□□□ 0.79
MRPL28-210ENST00000483764 MICU3Q86XE3 530 aa19.99■□□□□ 0.79
MRPL28-210ENST00000483764 ZC3H15Q8WU90 426 aaKnown RBP19.99■□□□□ 0.79
MRPL28-210ENST00000483764 MYL10Q9BUA6 226 aa19.99■□□□□ 0.79
MRPL28-210ENST00000483764 KAT14Q9H8E8 782 aa19.99■□□□□ 0.79
MRPL28-210ENST00000483764 NCOA5Q9HCD5 579 aaKnown RBP19.99■□□□□ 0.79
MRPL28-210ENST00000483764 MTMR4Q9NYA4 1195 aa19.99■□□□□ 0.79
MRPL28-210ENST00000483764 DHX16O60231 1041 aaKnown RBP19.98■□□□□ 0.79
MRPL28-210ENST00000483764 PRPF40AO75400 957 aaKnown RBP19.98■□□□□ 0.79
MRPL28-210ENST00000483764 RCAN1P53805 252 aa19.98■□□□□ 0.79
MRPL28-210ENST00000483764 ABCB5Q2M3G0 1257 aa19.98■□□□□ 0.79
MRPL28-210ENST00000483764 NBPF12Q5TAG4 269 aaPredicted RBP19.98■□□□□ 0.79
MRPL28-210ENST00000483764 HOOK2Q96ED9 719 aa19.98■□□□□ 0.79
MRPL28-210ENST00000483764 GOLGA8AA7E2F4 631 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 ZSCAN22P10073 491 aaPredicted RBP19.97■□□□□ 0.79
MRPL28-210ENST00000483764 RXRAP19793 462 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 RRP1BQ14684 758 aaKnown RBP19.97■□□□□ 0.79
MRPL28-210ENST00000483764 PPP4R3BQ5MIZ7 849 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 TMEM179Q6ZVK1 233 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 PNMA8AQ86V59 439 aaPredicted RBP19.97■□□□□ 0.79
MRPL28-210ENST00000483764 TMEM47Q9BQJ4 181 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 LLPHQ9BRT6 129 aaKnown RBP19.97■□□□□ 0.79
MRPL28-210ENST00000483764 CABP5Q9NP86 173 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 DDAH1O94760 285 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 GDF11O95390 407 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 CALM1P0DP23 149 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 CALM2P0DP24 149 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 CALM3P0DP25 149 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 TOP1P11387 765 aaKnown RBP19.97■□□□□ 0.79
MRPL28-210ENST00000483764 TROAPQ12815 778 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 PRAMEF18Q5VWM3 479 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 SULF1Q8IWU6 871 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 CCDC144CPQ8IYA2 1237 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 FANCBQ8NB91 859 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 NUP133Q8WUM0 1156 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 KANSL2Q9H9L4 492 aa19.97■□□□□ 0.79
MRPL28-210ENST00000483764 STX6O43752 255 aa19.96■□□□□ 0.79
MRPL28-210ENST00000483764 LETM1O95202 739 aaPredicted RBP19.96■□□□□ 0.79
MRPL28-210ENST00000483764 TTLL1O95922 423 aa19.96■□□□□ 0.79
MRPL28-210ENST00000483764 GH2P01242 217 aa19.96■□□□□ 0.79
MRPL28-210ENST00000483764 DCAF15Q66K64 600 aa19.96■□□□□ 0.79
MRPL28-210ENST00000483764 PNMA1Q8ND90 353 aa19.96■□□□□ 0.79
MRPL28-210ENST00000483764 NID2Q14112 1375 aa19.96■□□□□ 0.79
MRPL28-210ENST00000483764 CPLX1O14810 134 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 CTDNEP1O95476 244 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 CDC27P30260 824 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 ADD1P35611 737 aaKnown RBP19.95■□□□□ 0.78
MRPL28-210ENST00000483764 JAG1P78504 1218 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 CCDC173Q0VFZ6 552 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 SEPT2Q15019 361 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 PPP2R5BQ15173 497 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 RTN1Q16799 776 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 SHROOM1Q2M3G4 852 aaPredicted RBP19.95■□□□□ 0.78
MRPL28-210ENST00000483764 ZSCAN23Q3MJ62 389 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 SUPT20HL1Q3ZLR7 823 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 EAPPQ56P03 285 aaPredicted RBP19.95■□□□□ 0.78
MRPL28-210ENST00000483764 FAM217BQ9NTX9 383 aaPredicted RBP19.95■□□□□ 0.78
MRPL28-210ENST00000483764 CLIP2Q9UDT6 1046 aa19.95■□□□□ 0.78
MRPL28-210ENST00000483764 WDR90Q96KV7 1748 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms