RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 USP50Q70EL3 339 aaPredicted RBP12.48□□□□□ -0.41
EWSR1-217ENST00000483415 SPC24Q8NBT2 197 aa12.48□□□□□ -0.41
EWSR1-217ENST00000483415 TRERF1Q96PN7 1200 aa12.48□□□□□ -0.41
EWSR1-217ENST00000483415 AATFQ9NY61 560 aaKnown RBP eCLIP12.48□□□□□ -0.41
EWSR1-217ENST00000483415 TDO2P48775 406 aa12.48□□□□□ -0.41
EWSR1-217ENST00000483415 CCDC112Q8NEF3 446 aa12.48□□□□□ -0.41
EWSR1-217ENST00000483415 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
EWSR1-217ENST00000483415 MYOZ2Q9NPC6 264 aa12.48□□□□□ -0.41
EWSR1-217ENST00000483415 PALD1Q9ULE6 856 aa12.48□□□□□ -0.41
EWSR1-217ENST00000483415 TRPM7Q96QT4 1865 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
EWSR1-217ENST00000483415 GOLGA6L6A8MZA4 724 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 USP5P45974 858 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 TRDNQ13061 729 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 NBPF3Q9H094 633 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
EWSR1-217ENST00000483415 ZNF541Q9H0D2 1346 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 H7C1D1 291 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
EWSR1-217ENST00000483415 MUM1L1Q5H9M0 696 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 USP40Q9NVE5 1235 aa12.47□□□□□ -0.41
EWSR1-217ENST00000483415 ESR2Q92731 530 aa12.46□□□□□ -0.41
EWSR1-217ENST00000483415 ZNF274Q96GC6 653 aaPredicted RBP12.46□□□□□ -0.41
EWSR1-217ENST00000483415 ZNF70Q9UC06 446 aaPredicted RBP12.46□□□□□ -0.41
EWSR1-217ENST00000483415 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 LRMPQ12912 555 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 DIXDC1Q155Q3 683 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 MFSD6Q6ZSS7 791 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 RASEFQ8IZ41 740 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 OTOFQ9HC10 1997 aa12.46□□□□□ -0.42
EWSR1-217ENST00000483415 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 GLTPD2A6NH11 291 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
EWSR1-217ENST00000483415 PI4KBQ9UBF8 816 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 GMPSP49915 693 aaPredicted RBP12.45□□□□□ -0.42
EWSR1-217ENST00000483415 MIGA1Q8NAN2 632 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 ZNF215Q9UL58 517 aaPredicted RBP12.45□□□□□ -0.42
EWSR1-217ENST00000483415 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 RCSD1Q6JBY9 416 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 LLPHQ9BRT6 129 aaKnown RBP12.45□□□□□ -0.42
EWSR1-217ENST00000483415 FHOD1Q9Y613 1164 aa12.45□□□□□ -0.42
EWSR1-217ENST00000483415 SCNN1DP51172 638 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 UBE2HP62256 183 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
EWSR1-217ENST00000483415 DGKHQ86XP1 1220 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 RSPH14Q9UHP6 348 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 IGKV6D-41A0A0C4DH26 115 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 DHX16O60231 1041 aaKnown RBP12.44□□□□□ -0.42
EWSR1-217ENST00000483415 RAD17O75943 681 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 CALM1P0DP23 149 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 CALM2P0DP24 149 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 CALM3P0DP25 149 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 SMARCA1P28370 1054 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
EWSR1-217ENST00000483415 NEK4P51957 841 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 SART3Q15020 963 aaKnown RBP12.44□□□□□ -0.42
EWSR1-217ENST00000483415 STOX1Q6ZVD7 989 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 KIAA0825Q8IV33 1275 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 RNF181Q9P0P0 153 aa12.44□□□□□ -0.42
EWSR1-217ENST00000483415 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.44□□□□□ -0.42
EWSR1-217ENST00000483415 H2AFXP16104 143 aaPredicted RBP12.43□□□□□ -0.42
EWSR1-217ENST00000483415 CCDC186Q7Z3E2 898 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 TBC1D10CQ8IV04 446 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 JAKMIP1Q96N16 626 aaKnown RBP12.43□□□□□ -0.42
EWSR1-217ENST00000483415 PDRG1Q9NUG6 133 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 CNOT7Q9UIV1 285 aaKnown RBP12.43□□□□□ -0.42
EWSR1-217ENST00000483415 CNPY2Q9Y2B0 182 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 MYH6P13533 1939 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 KIF4BQ2VIQ3 1234 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
EWSR1-217ENST00000483415 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 LIMCH1Q9UPQ0 1083 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
EWSR1-217ENST00000483415 WNT10BO00744 389 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 PRKAB2O43741 272 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 CHGBP05060 677 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 APPP05067 770 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
EWSR1-217ENST00000483415 CEP135Q66GS9 1140 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
EWSR1-217ENST00000483415 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 ERO1AQ96HE7 468 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 NRBP1Q9UHY1 535 aa12.43□□□□□ -0.42
EWSR1-217ENST00000483415 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
EWSR1-217ENST00000483415 USP17L21D6R901 530 aa12.42□□□□□ -0.42
EWSR1-217ENST00000483415 SH2B2O14492 632 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms