RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CCDC184Q52MB2 194 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 PLA2G2CQ5R387 149 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 BEND3Q5T5X7 828 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 INTS3Q68E01 1043 aaKnown RBP7.4□□□□□ -1.22
CSDE1-207ENST00000483407 ANKRD13AQ8IZ07 590 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 ERO1AQ96HE7 468 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 ZNF594Q96JF6 807 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-207ENST00000483407 CLMNQ96JQ2 1002 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 PRMT6Q96LA8 375 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-207ENST00000483407 R3HDMLQ9H3Y0 253 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 MRS2Q9HD23 443 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-207ENST00000483407 FZD1Q9UP38 647 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 MAP4K5Q9Y4K4 846 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 PCDHGA11Q9Y5H2 935 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 PSME4Q14997 1843 aa7.4□□□□□ -1.23
CSDE1-207ENST00000483407 IGF2BP3O00425 579 aaKnown RBP eCLIP7.39□□□□□ -1.233e-6■■■□□ 19.1
CSDE1-207ENST00000483407 ALDH1L1O75891 902 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 HIBADHP31937 336 aaKnown RBP7.39□□□□□ -1.23
CSDE1-207ENST00000483407 SKOR1P84550 965 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 UBE4AQ14139 1066 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 ARHGEF6Q15052 776 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 MFSD14BQ5SR56 506 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 NBPF12Q5TAG4 269 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-207ENST00000483407 SND1Q7KZF4 910 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSDE1-207ENST00000483407 GCC1Q96CN9 775 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 KCTD15Q96SI1 283 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-207ENST00000483407 TTF2Q9UNY4 1162 aaKnown RBP7.39□□□□□ -1.23
CSDE1-207ENST00000483407 JAG2Q9Y219 1238 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 PCDHAC2Q9Y5I4 1007 aa7.39□□□□□ -1.23
CSDE1-207ENST00000483407 FAM205AQ6ZU69 1335 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 ANP32CO43423 234 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 FRAT2O75474 233 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-207ENST00000483407 USP2O75604 605 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-207ENST00000483407 WDHD1O75717 1129 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-207ENST00000483407 ARID4AP29374 1257 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-207ENST00000483407 TNNI2P48788 182 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 RPIAP49247 311 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 SEC13P55735 322 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 CRHR2Q13324 411 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 EPHA10Q5JZY3 1008 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 CCDC102BQ68D86 513 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 SLC4A10Q6U841 1118 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 OTOP1Q7RTM1 612 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 VPS37DQ86XT2 251 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 TDRD7Q8NHU6 1098 aaKnown RBP7.38□□□□□ -1.23
CSDE1-207ENST00000483407 SRCIN1Q9C0H9 1055 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 ZNF70Q9UC06 446 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-207ENST00000483407 PCDHB11Q9Y5F2 797 aa7.38□□□□□ -1.23
CSDE1-207ENST00000483407 SSC5DA1L4H1 1573 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 MROH5Q6ZUA9 1318 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 CRKP46108 304 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 GYG1P46976 350 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 SP3Q02447 781 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 CAVIN4Q5BKX8 364 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 PPP1R18Q6NYC8 613 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 DZIP1LQ8IYY4 767 aaKnown RBP7.37□□□□□ -1.23
CSDE1-207ENST00000483407 C1orf216Q8TAB5 229 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 CD99L2Q8TCZ2 262 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 TBC1D22AQ8WUA7 517 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 OPTNQ96CV9 577 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 FAM84BQ96KN1 310 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-207ENST00000483407 TDRD3Q9H7E2 651 aaKnown RBP7.37□□□□□ -1.23
CSDE1-207ENST00000483407 ELP3Q9H9T3 547 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 ZFYVE28Q9HCC9 887 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 MTMR7Q9Y216 660 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 PTPN22Q9Y2R2 807 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 CSADQ9Y600 493 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 MYH3P11055 1940 aa7.37□□□□□ -1.23
CSDE1-207ENST00000483407 AOX1Q06278 1338 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 TCP10L2B9ZVM9 353 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 GTF2A2P52657 109 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
CSDE1-207ENST00000483407 TAF1CQ15572 869 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-207ENST00000483407 METTL24Q5JXM2 366 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 ARMC5Q96C12 935 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 HOOK2Q96ED9 719 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 SUCLG2Q96I99 432 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 CDK15Q96Q40 435 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 PTPN18Q99952 460 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.36□□□□□ -1.23
CSDE1-207ENST00000483407 TMOD2Q9NZR1 351 aa7.36□□□□□ -1.23
CSDE1-207ENST00000483407 MAST3O60307 1309 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 CCL15-CCL14A0A0B4J2E2 113 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 CHAF1AQ13111 956 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-207ENST00000483407 VGLL4Q14135 290 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 KIF22Q14807 665 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 CCL15Q16663 113 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 INTS6LQ5JSJ4 861 aaKnown RBP7.35□□□□□ -1.23
CSDE1-207ENST00000483407 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-207ENST00000483407 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-207ENST00000483407 FBXO33Q7Z6M2 555 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 NBPF11Q86T75 865 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.35□□□□□ -1.23
CSDE1-207ENST00000483407 TPCN2Q8NHX9 752 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 BRI3BPQ8WY22 251 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 TEKT1Q969V4 418 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 TEPSINQ96N21 525 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms