RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 GRK4P32298 578 aa6.55□□□□□ -1.36
RPA3-207ENST00000483031 ETV3P41162 512 aa6.55□□□□□ -1.36
RPA3-207ENST00000483031 CDH24Q86UP0 819 aa6.55□□□□□ -1.36
RPA3-207ENST00000483031 IRF2BP1Q8IU81 584 aa6.55□□□□□ -1.36
RPA3-207ENST00000483031 GAL3ST3Q96A11 431 aa6.55□□□□□ -1.36
RPA3-207ENST00000483031 C20orf173Q96LM9 149 aa6.55□□□□□ -1.36
RPA3-207ENST00000483031 TRIT1Q9H3H1 467 aaKnown RBP6.55□□□□□ -1.36
RPA3-207ENST00000483031 PARD6AQ9NPB6 346 aa6.55□□□□□ -1.36
RPA3-207ENST00000483031 TPP2P29144 1249 aaPredicted RBP6.54□□□□□ -1.36
RPA3-207ENST00000483031 TRHRP34981 398 aaPredicted RBP6.54□□□□□ -1.36
RPA3-207ENST00000483031 LILRA2Q8N149 483 aa6.54□□□□□ -1.36
RPA3-207ENST00000483031 PDZD8Q8NEN9 1154 aa6.54□□□□□ -1.36
RPA3-207ENST00000483031 SLC6A17Q9H1V8 727 aa6.54□□□□□ -1.36
RPA3-207ENST00000483031 ZCCHC4Q9H5U6 513 aa6.54□□□□□ -1.36
RPA3-207ENST00000483031 UNC13AQ9UPW8 1703 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 SEMA7AO75326 666 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 MAPK8P45983 427 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 DLG4P78352 724 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 ALG1LQ6GMV1 187 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 SV2BQ7L1I2 683 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 OXR1Q8N573 874 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 BAHD1Q8TBE0 780 aaPredicted RBP6.53□□□□□ -1.36
RPA3-207ENST00000483031 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 FAM8A1Q9UBU6 413 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 GNEQ9Y223 722 aaKnown RBP6.53□□□□□ -1.36
RPA3-207ENST00000483031 TACC3Q9Y6A5 838 aa6.53□□□□□ -1.36
RPA3-207ENST00000483031 BMP7P18075 431 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 CDK8P49336 464 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 PDE4CQ08493 712 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 GAB4Q2WGN9 574 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 TTBK2Q6IQ55 1244 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 C19orf44Q9H6X5 657 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 C12orf49Q9H741 205 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 DUSP13Q9UII6 198 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 SPG7Q9UQ90 795 aa6.52□□□□□ -1.37
RPA3-207ENST00000483031 FITM1A5D6W6 292 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 WASH4PA8MWX3 477 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 PEX10O60683 326 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 LMNB1P20700 586 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 EGR3Q06889 387 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 ZNF605Q86T29 641 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 DHX38Q92620 1227 aaKnown RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 SYTL4Q96C24 671 aaPredicted RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 Q96M66 194 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 DPH2Q9BQC3 489 aaPredicted RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 DUSP15Q9H1R2 295 aaPredicted RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 SP110Q9HB58 689 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 CWC22Q9HCG8 908 aaKnown RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 GPATCH2Q9NW75 528 aa6.51□□□□□ -1.37
RPA3-207ENST00000483031 CNOT6Q9ULM6 557 aaKnown RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 TTF2Q9UNY4 1162 aaKnown RBP6.51□□□□□ -1.37
RPA3-207ENST00000483031 SHROOM4Q9ULL8 1493 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 RBAK-RBAKDNI3L0D1 243 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 ZGLP1P0C6A0 271 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 ATP2B2Q01814 1243 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 FMR1Q06787 632 aaKnown RBP eCLIP6.5□□□□□ -1.37
RPA3-207ENST00000483031 SLC6A19Q695T7 634 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 TMEM132EQ6IEE7 984 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 TMEM87BQ96K49 555 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 ARID3AQ99856 593 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 TJP2Q9UDY2 1190 aa6.5□□□□□ -1.37
RPA3-207ENST00000483031 RFXAPO00287 272 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 GFRA2O00451 464 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 FOXD2O60548 495 aaPredicted RBP6.49□□□□□ -1.37
RPA3-207ENST00000483031 PGRP06401 933 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 LTKP29376 864 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 RPS26P62854 115 aaKnown RBP6.49□□□□□ -1.37
RPA3-207ENST00000483031 ZNF385BQ569K4 471 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 TCERG1LQ5VWI1 586 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 INTS4Q96HW7 963 aaKnown RBP6.49□□□□□ -1.37
RPA3-207ENST00000483031 SETDB2Q96T68 719 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
RPA3-207ENST00000483031 YBX2Q9Y2T7 364 aaKnown RBP6.49□□□□□ -1.37
RPA3-207ENST00000483031 TEX51A0A1B0GUA7 166 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 MYOCOSA0A1B0GUC4 107 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 PDE4BQ07343 736 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 SEPT6Q14141 434 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 NR0B2Q15466 257 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 TSPYL5Q86VY4 417 aaPredicted RBP6.48□□□□□ -1.37
RPA3-207ENST00000483031 ZSCAN29Q8IWY8 852 aaPredicted RBP6.48□□□□□ -1.37
RPA3-207ENST00000483031 DNAJB8Q8NHS0 232 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 KCNH3Q9ULD8 1083 aa6.48□□□□□ -1.37
RPA3-207ENST00000483031 A0A0G2JLL6 359 aaPredicted RBP6.47□□□□□ -1.37
RPA3-207ENST00000483031 PDE6BP35913 854 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 TIGD5Q53EQ6 642 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 SPPL2CQ8IUH8 684 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 TMEM151BQ8IW70 566 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 KCNC2Q96PR1 638 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 ZNF552Q9H707 407 aaPredicted RBP6.47□□□□□ -1.37
RPA3-207ENST00000483031 WWC3Q9ULE0 1092 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 KCTD3Q9Y597 815 aa6.47□□□□□ -1.37
RPA3-207ENST00000483031 SYN1P17600 705 aa6.46□□□□□ -1.38
RPA3-207ENST00000483031 EIF4G1Q04637 1599 aaKnown RBP6.46□□□□□ -1.38
RPA3-207ENST00000483031 CHRNEQ04844 493 aa6.46□□□□□ -1.38
RPA3-207ENST00000483031 NFIXQ14938 502 aa6.46□□□□□ -1.38
RPA3-207ENST00000483031 SNX17Q15036 470 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms