RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 INTS6LQ5JSJ4 861 aaKnown RBP5.21□□□□□ -1.58
SHQ1-208ENST00000482785 COX20Q5RI15 118 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 STYK1Q6J9G0 422 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 ANKLE1Q8NAG6 615 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 FBF1Q8TES7 1133 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 CDCA5Q96FF9 252 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 MYO19Q96H55 970 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 FRMD6Q96NE9 622 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 C2orf49Q9BVC5 232 aaPredicted RBP5.21□□□□□ -1.58
SHQ1-208ENST00000482785 CDK19Q9BWU1 502 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 LNPKQ9C0E8 428 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 TMA7Q9Y2S6 64 aaKnown RBP5.21□□□□□ -1.58
SHQ1-208ENST00000482785 KALRNO60229 2985 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 FAM205AQ6ZU69 1335 aa5.21□□□□□ -1.58
SHQ1-208ENST00000482785 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 KDRP35968 1356 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 MYO9AB2RTY4 2548 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 ZBTB24O43167 697 aaPredicted RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 TFRCP02786 760 aaKnown RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 SRGNP10124 158 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 BRD2P25440 801 aaKnown RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 GGCXP38435 758 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 RAB15P59190 212 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 SKOR1P84550 965 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 TRIM32Q13049 653 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 ADGRE1Q14246 886 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 AAK1Q2M2I8 961 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 C9orf50Q5SZB4 431 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 NECAB2Q7Z6G3 386 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 RTKN2Q8IZC4 609 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 GJD3Q8N144 294 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 BRIP1Q9BX63 1249 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 ARHGAP39Q9C0H5 1083 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 ACBD3Q9H3P7 528 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 OSBPL3Q9H4L5 887 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 SCHIP1Q9P0W5 487 aaPredicted RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 PDZRN3Q9UPQ7 1066 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 SPTAN1Q13813 2472 aaKnown RBP5.2□□□□□ -1.58
SHQ1-208ENST00000482785 TENM4Q6N022 2769 aa5.2□□□□□ -1.58
SHQ1-208ENST00000482785 FBN3Q75N90 2809 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 KIF24Q5T7B8 1368 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 PNMA6FA0A0J9YX94 578 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 GNRH1P01148 92 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 GTF2F1P35269 517 aaKnown RBP eCLIP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 PSMA6P60900 246 aaKnown RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 RBL2Q08999 1139 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 VASH1Q7L8A9 365 aaPredicted RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 ZBTB38Q8NAP3 1195 aaPredicted RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 DHX38Q92620 1227 aaKnown RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 DCPSQ96C86 337 aaKnown RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 LTV1Q96GA3 475 aaPredicted RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 CRELD1Q96HD1 420 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 CHAMP1Q96JM3 812 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 GAS2L1Q99501 681 aaPredicted RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 NIF3L1Q9GZT8 377 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 C14orf93Q9H972 538 aaKnown RBP5.19□□□□□ -1.58
SHQ1-208ENST00000482785 ETNK1Q9HBU6 452 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 CYLDQ9NQC7 956 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 ATG3Q9NT62 314 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 RNF19AQ9NV58 838 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 SERTAD1Q9UHV2 236 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 CHMP3Q9Y3E7 222 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 EMILIN1Q9Y6C2 1016 aa5.19□□□□□ -1.58
SHQ1-208ENST00000482785 FRYLO94915 3013 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 NPC1L1Q9UHC9 1359 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 TECTAO75443 2155 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 C2CD3Q4AC94 2353 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 PRRC2BQ5JSZ5 2229 aaKnown RBP5.18□□□□□ -1.58
SHQ1-208ENST00000482785 TLDC2A0PJX2 215 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 PRR23AA6NEV1 266 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 A6NJY4 79 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 VARSP26640 1264 aaKnown RBP5.18□□□□□ -1.58
SHQ1-208ENST00000482785 MZF1P28698 734 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-208ENST00000482785 FKBP1BP68106 108 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 ARID5AQ03989 594 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 CXCL9Q07325 125 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 DHX9Q08211 1270 aaKnown RBP5.18□□□□□ -1.58
SHQ1-208ENST00000482785 ARHGEF6Q15052 776 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 RGL3Q3MIN7 710 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 SLC9A9Q8IVB4 645 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 ZNF654Q8IZM8 581 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 ZKSCAN4Q969J2 545 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-208ENST00000482785 EMID1Q96A84 441 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-208ENST00000482785 PRDM12Q9H4Q4 367 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 ZNF576Q9H609 170 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 CNOT7Q9UIV1 285 aaKnown RBP5.18□□□□□ -1.58
SHQ1-208ENST00000482785 TRAK1Q9UPV9 953 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 AK5Q9Y6K8 562 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 ZNF831Q5JPB2 1677 aa5.18□□□□□ -1.58
SHQ1-208ENST00000482785 SNED1Q8TER0 1413 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 DSPP15924 2871 aaKnown RBP5.17□□□□□ -1.58
SHQ1-208ENST00000482785 PROB1E7EW31 1015 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 ZBTB39O15060 712 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 CYP27B1O15528 508 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 NEFLP07196 543 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 ALADP13716 330 aa5.17□□□□□ -1.58
SHQ1-208ENST00000482785 DNAJA1P31689 397 aaKnown RBP5.17□□□□□ -1.58
SHQ1-208ENST00000482785 GRK4P32298 578 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms