RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 KRT2P35908 639 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 LCORLQ8N3X6 602 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 CTAGE1Q96RT6 745 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 TSPYL1Q9H0U9 437 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 PIP4K2BP78356 416 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 PTGDRQ13258 359 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 CCDC181Q5TID7 509 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 SPATA5Q8NB90 893 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 MAP3K14Q99558 947 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 SMIM22K7EJ46 135 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 STAT6P42226 847 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 RNASE9P60153 205 aaKnown RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 IQCA1Q86XH1 822 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 GPATCH11Q8N954 259 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 CTCFLQ8NI51 663 aaPredicted RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 NELFBQ8WX92 580 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 STRBPQ96SI9 672 aaKnown RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 CHP1Q99653 195 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 PATL2C9JE40 543 aaKnown RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 MTIF2P46199 727 aaKnown RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 CCDC96Q2M329 555 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 GOLGA5Q8TBA6 731 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 IGDCC4Q8TDY8 1250 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 TANGO6Q9C0B7 1094 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 CNNM2Q9H8M5 875 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 FBXO2Q9UK22 296 aaPredicted RBP14.35□□□□□ -0.11
VPS52-218ENST00000482399 GDAQ9Y2T3 454 aa14.35□□□□□ -0.11
VPS52-218ENST00000482399 TNKSO95271 1327 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 TRIM49BA6NDI0 452 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 POTEB2H3BUK9 544 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 FMNL1O95466 1100 aaPredicted RBP14.34□□□□□ -0.11
VPS52-218ENST00000482399 CYP27A1Q02318 531 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 CCDC178Q5BJE1 867 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 RASGRP4Q8TDF6 673 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 NCAPD2Q15021 1401 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 MFAP3LO75121 409 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 KCNJ6P48051 423 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 FAM47AQ5JRC9 791 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 TTC38Q5R3I4 469 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 ANKRD13CQ8N6S4 541 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 TTLL11Q8NHH1 800 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 ESR2Q92731 530 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 PAGE5Q96GU1 130 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
VPS52-218ENST00000482399 CIAO1O76071 339 aa14.33□□□□□ -0.11
VPS52-218ENST00000482399 IFNAR1P17181 557 aa14.33□□□□□ -0.11
VPS52-218ENST00000482399 KRT31Q15323 416 aa14.33□□□□□ -0.11
VPS52-218ENST00000482399 IQUBQ8NA54 791 aa14.33□□□□□ -0.11
VPS52-218ENST00000482399 UIMC1Q96RL1 719 aa14.33□□□□□ -0.11
VPS52-218ENST00000482399 TTF2Q9UNY4 1162 aaKnown RBP14.33□□□□□ -0.11
VPS52-218ENST00000482399 PDE8BO95263 885 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 UBA7P41226 1012 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 PAK1Q13153 545 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 EXOC4Q96A65 974 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 NBPF3Q9H094 633 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 KCNJ18B7U540 433 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 RAD21O60216 631 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 ZEB2O60315 1214 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 IVLP07476 585 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 IDEP14735 1019 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.12
VPS52-218ENST00000482399 MORC3Q14149 939 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 KCNJ12Q14500 433 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 TMTC1Q8IUR5 882 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 TMEM139Q8IV31 216 aa14.33□□□□□ -0.12
VPS52-218ENST00000482399 CRACR2BQ8N4Y2 399 aaPredicted RBP14.33□□□□□ -0.12
VPS52-218ENST00000482399 NOC3LQ8WTT2 800 aaKnown RBP14.33□□□□□ -0.12
VPS52-218ENST00000482399 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
VPS52-218ENST00000482399 RGPD8O14715 1765 aaPredicted RBP14.32□□□□□ -0.12
VPS52-218ENST00000482399 RFX7Q2KHR2 1363 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 RNF40O75150 1001 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 CXCR5P32302 372 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 STIM1Q13586 685 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 RASGRF1Q13972 1273 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 NR1I3Q14994 352 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 KIFC2Q96AC6 838 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 EPN1Q9Y6I3 576 aaPredicted RBP14.32□□□□□ -0.12
VPS52-218ENST00000482399 HEG1Q9ULI3 1381 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 MARCH6O60337 910 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 CUL4BQ13620 913 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 AFAP1L1Q8TED9 768 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 VAT1LQ9HCJ6 419 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 SRPRBQ9Y5M8 271 aaKnown RBP14.32□□□□□ -0.12
VPS52-218ENST00000482399 JCADQ9P266 1359 aa14.32□□□□□ -0.12
VPS52-218ENST00000482399 IGHMBP2P38935 993 aaKnown RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 SPA17Q15506 151 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 TTC31Q49AM3 519 aaPredicted RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 MAP9Q49MG5 647 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 ZBTB38Q8NAP3 1195 aaPredicted RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 PIK3C2AO00443 1686 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 ATP8B1O43520 1251 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms