RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 PUS7LQ9H0K6 701 aaKnown RBP23.88■■□□□ 1.41
MSH5-215ENST00000482280 EMILIN3Q9NT22 766 aa23.88■■□□□ 1.41
MSH5-215ENST00000482280 ARPP21Q9UBL0 812 aaPredicted RBP23.88■■□□□ 1.41
MSH5-215ENST00000482280 GABRQQ9UN88 632 aa23.88■■□□□ 1.41
MSH5-215ENST00000482280 RNF113AO15541 343 aaKnown RBP23.87■■□□□ 1.41
MSH5-215ENST00000482280 EN2P19622 333 aaPredicted RBP23.87■■□□□ 1.41
MSH5-215ENST00000482280 MX1P20591 662 aa23.87■■□□□ 1.41
MSH5-215ENST00000482280 SEPT2Q15019 361 aa23.87■■□□□ 1.41
MSH5-215ENST00000482280 NKX2-3Q8TAU0 364 aa23.87■■□□□ 1.41
MSH5-215ENST00000482280 C12orf42Q96LP6 360 aa23.87■■□□□ 1.41
MSH5-215ENST00000482280 CCDC17Q96LX7 622 aa23.87■■□□□ 1.41
MSH5-215ENST00000482280 FSD1Q9BTV5 496 aa23.87■■□□□ 1.41
MSH5-215ENST00000482280 SH2D4AQ9H788 454 aa23.87■■□□□ 1.41
MSH5-215ENST00000482280 APPP05067 770 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 GNAT2P19087 354 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 IRF5Q13568 498 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 C12orf60Q5U649 245 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 DYNLL2Q96FJ2 89 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 PAGR1Q9BTK6 254 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 ARHGEF10LQ9HCE6 1279 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 MORF4L1Q9UBU8 362 aa23.86■■□□□ 1.41
MSH5-215ENST00000482280 SLC44A5Q8NCS7 719 aa23.85■■□□□ 1.41
MSH5-215ENST00000482280 PXYLP1Q8TE99 480 aa23.85■■□□□ 1.41
MSH5-215ENST00000482280 RNF208Q9H0X6 261 aa23.85■■□□□ 1.41
MSH5-215ENST00000482280 DDX60LQ5H9U9 1706 aaKnown RBP23.84■■□□□ 1.41
MSH5-215ENST00000482280 CHGBP05060 677 aa23.84■■□□□ 1.41
MSH5-215ENST00000482280 CCNA1P78396 465 aa23.84■■□□□ 1.41
MSH5-215ENST00000482280 HDAC1Q13547 482 aaPredicted RBP23.84■■□□□ 1.41
MSH5-215ENST00000482280 ACER1Q8TDN7 264 aa23.84■■□□□ 1.41
MSH5-215ENST00000482280 STRBPQ96SI9 672 aaKnown RBP23.84■■□□□ 1.41
MSH5-215ENST00000482280 CCL5P13501 91 aa23.83■■□□□ 1.41
MSH5-215ENST00000482280 VCAM1P19320 739 aa23.83■■□□□ 1.41
MSH5-215ENST00000482280 MAPK4P31152 587 aa23.83■■□□□ 1.41
MSH5-215ENST00000482280 TDO2P48775 406 aa23.83■■□□□ 1.41
MSH5-215ENST00000482280 CDK8P49336 464 aa23.83■■□□□ 1.41
MSH5-215ENST00000482280 GIMAP6Q6P9H5 292 aa23.83■■□□□ 1.41
MSH5-215ENST00000482280 NACAP1Q9BZK3 213 aa23.83■■□□□ 1.41
MSH5-215ENST00000482280 RWDD1Q9H446 243 aaPredicted RBP23.83■■□□□ 1.41
MSH5-215ENST00000482280 CYP2D7A0A087X1C5 515 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 ELNP15502 786 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 ICA1Q05084 483 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 MTFR1Q15390 333 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 CTR9Q6PD62 1173 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 C16orf86Q6ZW13 317 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 SOCS4Q8WXH5 440 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 RPAP3Q9H6T3 665 aaPredicted RBP23.82■■□□□ 1.4
MSH5-215ENST00000482280 MKNK2Q9HBH9 465 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 ZNF287Q9HBT7 754 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 MYH7P12883 1935 aa23.82■■□□□ 1.4
MSH5-215ENST00000482280 MGAMO43451 1857 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 MINDY4BA8MYZ0 360 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 GPAA1O43292 621 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 INHAP05111 366 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 ERVK-9P63128 1117 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 ERVK-24P63145 666 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 ATP2B2Q01814 1243 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 EVX2Q03828 476 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 PRPF38BQ5VTL8 546 aaKnown RBP23.81■■□□□ 1.4
MSH5-215ENST00000482280 CATSPERGQ6ZRH7 1159 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 OSBP2Q969R2 916 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 TANGO6Q9C0B7 1094 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 RABGAP1Q9Y3P9 1069 aa23.81■■□□□ 1.4
MSH5-215ENST00000482280 RBBP6Q7Z6E9 1792 aaKnown RBP23.8■■□□□ 1.4
MSH5-215ENST00000482280 AKR1B1P15121 316 aa23.8■■□□□ 1.4
MSH5-215ENST00000482280 GUCY1A2P33402 732 aa23.8■■□□□ 1.4
MSH5-215ENST00000482280 WDR78Q5VTH9 848 aa23.8■■□□□ 1.4
MSH5-215ENST00000482280 PI4K2BQ8TCG2 481 aa23.8■■□□□ 1.4
MSH5-215ENST00000482280 OTUD7AQ8TE49 926 aaPredicted RBP23.8■■□□□ 1.4
MSH5-215ENST00000482280 LPAR1Q92633 364 aa23.8■■□□□ 1.4
MSH5-215ENST00000482280 NUDT12Q9BQG2 462 aa23.8■■□□□ 1.4
MSH5-215ENST00000482280 GJB1P08034 283 aa23.79■■□□□ 1.4
MSH5-215ENST00000482280 SBK1Q52WX2 424 aa23.79■■□□□ 1.4
MSH5-215ENST00000482280 KANSL2Q9H9L4 492 aa23.79■■□□□ 1.4
MSH5-215ENST00000482280 TXNRD2Q9NNW7 524 aa23.79■■□□□ 1.4
MSH5-215ENST00000482280 RBPJLQ9UBG7 517 aa23.79■■□□□ 1.4
MSH5-215ENST00000482280 HMGCRP04035 888 aa23.78■■□□□ 1.4
MSH5-215ENST00000482280 SLC3A2P08195 630 aaKnown RBP23.78■■□□□ 1.4
MSH5-215ENST00000482280 HOXC10Q9NYD6 342 aa23.78■■□□□ 1.4
MSH5-215ENST00000482280 IVNS1ABPQ9Y6Y0 642 aa23.78■■□□□ 1.4
MSH5-215ENST00000482280 GSG1L2A8MUP6 293 aa23.77■■□□□ 1.4
MSH5-215ENST00000482280 RAD21O60216 631 aa23.77■■□□□ 1.4
MSH5-215ENST00000482280 COG2Q14746 738 aa23.77■■□□□ 1.4
MSH5-215ENST00000482280 TRMT44Q8IYL2 757 aaKnown RBP23.77■■□□□ 1.4
MSH5-215ENST00000482280 STK11IPQ8N1F8 1099 aa23.77■■□□□ 1.4
MSH5-215ENST00000482280 UNC93B1Q9H1C4 597 aa23.77■■□□□ 1.4
MSH5-215ENST00000482280 GOPCQ9HD26 462 aa23.77■■□□□ 1.4
MSH5-215ENST00000482280 HTTP42858 3142 aa23.77■■□□□ 1.4
MSH5-215ENST00000482280 A0A1W2PRG0 241 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 PATL2C9JE40 543 aaKnown RBP23.76■■□□□ 1.39
MSH5-215ENST00000482280 M0R2C6 588 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 CAPN2P17655 700 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 CYP2B6P20813 491 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 GJA8P48165 433 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 PLEKHH3Q7Z736 793 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 EVI5LQ96CN4 794 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 TMX2Q9Y320 296 aa23.76■■□□□ 1.39
MSH5-215ENST00000482280 RGS2P41220 211 aa23.75■■□□□ 1.39
MSH5-215ENST00000482280 GPR142Q7Z601 462 aa23.75■■□□□ 1.39
MSH5-215ENST00000482280 ZNF444Q8N0Y2 327 aaPredicted RBP23.75■■□□□ 1.39
MSH5-215ENST00000482280 U2AF1L4Q8WU68 220 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms