RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 DOCK3Q8IZD9 2030 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 VCAM1P19320 739 aa12.61□□□□□ -0.39
CPSF4-212ENST00000482251 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-212ENST00000482251 UBXN2AP68543 259 aa12.61□□□□□ -0.39
CPSF4-212ENST00000482251 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
CPSF4-212ENST00000482251 STK11IPQ8N1F8 1099 aa12.61□□□□□ -0.39
CPSF4-212ENST00000482251 RNF208Q9H0X6 261 aa12.61□□□□□ -0.39
CPSF4-212ENST00000482251 UNC93B1Q9H1C4 597 aa12.61□□□□□ -0.39
CPSF4-212ENST00000482251 PLXNB2O15031 1838 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 USP17L21D6R901 530 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 AKR1B1P15121 316 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 POTEEQ6S8J3 1075 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 PORCNQ9H237 461 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 ATP8A2Q9NTI2 1148 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
CPSF4-212ENST00000482251 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 M0R2C6 588 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 USP14P54578 494 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 ERVK-9P63128 1117 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 ERVK-24P63145 666 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 IRF5Q13568 498 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 GPRC5AQ8NFJ5 357 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 OSBP2Q969R2 916 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 C12orf42Q96LP6 360 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 RPAP3Q9H6T3 665 aaPredicted RBP12.59□□□□□ -0.39
CPSF4-212ENST00000482251 RBPJLQ9UBG7 517 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 SWAP70Q9UH65 585 aa12.59□□□□□ -0.39
CPSF4-212ENST00000482251 USP17L15C9J2P7 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L13C9JLJ4 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L11C9JVI0 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L18D6R9N7 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L22D6RA61 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L17D6RBQ6 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L19D6RCP7 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L20D6RJB6 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 CYP2B6P20813 491 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 CDK8P49336 464 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 ICA1Q05084 483 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 USP17L24Q0WX57 530 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 TRIM32Q13049 653 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 Q3C1V9 767 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 C12orf60Q5U649 245 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 WDR78Q5VTH9 848 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-212ENST00000482251 TMEM179Q6ZVK1 233 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 CCAR1Q8IX12 1150 aaKnown RBP12.58□□□□□ -0.4
CPSF4-212ENST00000482251 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 PI4K2BQ8TCG2 481 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 U2AF1L4Q8WU68 220 aaKnown RBP12.58□□□□□ -0.4
CPSF4-212ENST00000482251 APPBP2Q92624 585 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
CPSF4-212ENST00000482251 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
CPSF4-212ENST00000482251 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-212ENST00000482251 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
CPSF4-212ENST00000482251 GPAA1O43292 621 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 CNMDO75829 334 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 MX1P20591 662 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 GJA8P48165 433 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 CATSPERGQ6ZRH7 1159 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 PXYLP1Q8TE99 480 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 TRIB2Q92519 343 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 DEFB118Q96PH6 123 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 STRBPQ96SI9 672 aaKnown RBP12.57□□□□□ -0.4
CPSF4-212ENST00000482251 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
CPSF4-212ENST00000482251 EPB41L4AQ9HCS5 686 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-212ENST00000482251 ARPP21Q9UBL0 812 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-212ENST00000482251 GJD2Q9UKL4 321 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 TTC41PQ6P2S7 1318 aa12.57□□□□□ -0.4
CPSF4-212ENST00000482251 GSG1L2A8MUP6 293 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 MINDY4BA8MYZ0 360 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 ERC2O15083 957 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 RAD21O60216 631 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 HMGCRP04035 888 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 GJB1P08034 283 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 TDO2P48775 406 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 ANKRD45Q5TZF3 282 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 GPR142Q7Z601 462 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 GTF3C2Q8WUA4 911 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-212ENST00000482251 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 BTBD7Q9P203 1132 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-212ENST00000482251 A0A0G2JMZ2 1700 aa12.56□□□□□ -0.4
CPSF4-212ENST00000482251 GLRX3O76003 335 aaKnown RBP12.55□□□□□ -0.4
CPSF4-212ENST00000482251 FARP2O94887 1054 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-212ENST00000482251 APPP05067 770 aa12.55□□□□□ -0.4
CPSF4-212ENST00000482251 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms