RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 KRT27Q7Z3Y8 459 aa9.52□□□□□ -0.89
SPTA1-205ENST00000481212 TRIM42Q8IWZ5 723 aa9.52□□□□□ -0.89
SPTA1-205ENST00000481212 KLHDC7BQ96G42 594 aa9.52□□□□□ -0.89
SPTA1-205ENST00000481212 EAF1Q96JC9 268 aaPredicted RBP9.52□□□□□ -0.89
SPTA1-205ENST00000481212 PRAM1Q96QH2 718 aa9.52□□□□□ -0.89
SPTA1-205ENST00000481212 RALGAPBQ86X10 1494 aa9.52□□□□□ -0.89
SPTA1-205ENST00000481212 PXDNQ92626 1479 aa9.52□□□□□ -0.89
SPTA1-205ENST00000481212 GARTP22102 1010 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 POU4F3Q15319 338 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 VPS72Q15906 364 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
SPTA1-205ENST00000481212 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 SVOPQ8N4V2 548 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 KCNB2Q92953 911 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 GMLQ99445 158 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 CORO1BQ9BR76 489 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 CARD10Q9BWT7 1032 aa9.51□□□□□ -0.89
SPTA1-205ENST00000481212 ABCC11Q96J66 1382 aa9.5□□□□□ -0.89
SPTA1-205ENST00000481212 CCDC144AA2RUR9 1427 aa9.5□□□□□ -0.89
SPTA1-205ENST00000481212 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
SPTA1-205ENST00000481212 GSTP1P09211 210 aaKnown RBP9.5□□□□□ -0.89
SPTA1-205ENST00000481212 ATP2B1P20020 1258 aa9.5□□□□□ -0.89
SPTA1-205ENST00000481212 SETDB1Q15047 1291 aa9.5□□□□□ -0.89
SPTA1-205ENST00000481212 RASIP1Q5U651 963 aa9.5□□□□□ -0.89
SPTA1-205ENST00000481212 RASGRP4Q8TDF6 673 aa9.5□□□□□ -0.89
SPTA1-205ENST00000481212 C14orf93Q9H972 538 aaKnown RBP9.5□□□□□ -0.89
SPTA1-205ENST00000481212 BTG4Q9NY30 223 aa9.5□□□□□ -0.89
SPTA1-205ENST00000481212 DGKGP49619 791 aa9.49□□□□□ -0.89
SPTA1-205ENST00000481212 ZNF252P-AS1Q0IIN9 211 aa9.49□□□□□ -0.89
SPTA1-205ENST00000481212 MAP1SQ66K74 1059 aaPredicted RBP9.49□□□□□ -0.89
SPTA1-205ENST00000481212 PDZD3Q86UT5 571 aa9.49□□□□□ -0.89
SPTA1-205ENST00000481212 DTWD1Q8N5C7 304 aa9.49□□□□□ -0.89
SPTA1-205ENST00000481212 DCAF11Q8TEB1 546 aa9.49□□□□□ -0.89
SPTA1-205ENST00000481212 ZC3H12CQ9C0D7 883 aaKnown RBP9.49□□□□□ -0.89
SPTA1-205ENST00000481212 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
SPTA1-205ENST00000481212 YTHDC2Q9H6S0 1430 aaKnown RBP9.48□□□□□ -0.89
SPTA1-205ENST00000481212 TRIM37O94972 964 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 F13A1P00488 732 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 ATF4P18848 351 aaPredicted RBP9.48□□□□□ -0.89
SPTA1-205ENST00000481212 MAOBP27338 520 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 BNC2Q6ZN30 1099 aaPredicted RBP9.48□□□□□ -0.89
SPTA1-205ENST00000481212 FAM196AQ6ZSG2 479 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 GATAD2BQ8WXI9 593 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 NKD1Q969G9 470 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 SEC16BQ96JE7 1060 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 UBP1Q9NZI7 540 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 ANKRD30BQ9BXX2 1392 aa9.48□□□□□ -0.89
SPTA1-205ENST00000481212 HOXB4P17483 251 aaPredicted RBP9.47□□□□□ -0.89
SPTA1-205ENST00000481212 CD68P34810 354 aaPredicted RBP9.47□□□□□ -0.89
SPTA1-205ENST00000481212 HNRNPUQ00839 825 aaKnown RBP eCLIP9.47□□□□□ -0.89
SPTA1-205ENST00000481212 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
SPTA1-205ENST00000481212 SEPT6Q14141 434 aa9.47□□□□□ -0.89
SPTA1-205ENST00000481212 R3HDM1Q15032 1099 aaKnown RBP9.47□□□□□ -0.89
SPTA1-205ENST00000481212 GALNT11Q8NCW6 608 aa9.47□□□□□ -0.89
SPTA1-205ENST00000481212 DHX57Q6P158 1386 aaKnown RBP9.47□□□□□ -0.89
SPTA1-205ENST00000481212 SLIT2O94813 1529 aa9.46□□□□□ -0.89
SPTA1-205ENST00000481212 NLRP12P59046 1061 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 RAC1P63000 192 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 CHRNA2Q15822 529 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 MPRIPQ6WCQ1 1025 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 NGDNQ8NEJ9 315 aaKnown RBP9.46□□□□□ -0.9
SPTA1-205ENST00000481212 UBXN4Q92575 508 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPTA1-205ENST00000481212 EFR3BQ9Y2G0 817 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 KIF1BO60333 1816 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 SPATA31E1Q6ZUB1 1445 aa9.46□□□□□ -0.9
SPTA1-205ENST00000481212 FAM221AA4D161 298 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 SPDYE3A6NKU9 549 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 PIK3R2O00459 728 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 TLR3O15455 904 aaKnown RBP9.45□□□□□ -0.9
SPTA1-205ENST00000481212 DDX3YO15523 660 aaKnown RBP9.45□□□□□ -0.9
SPTA1-205ENST00000481212 DEAF1O75398 565 aaPredicted RBP9.45□□□□□ -0.9
SPTA1-205ENST00000481212 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 BPNT1O95861 308 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 COL9A2Q14055 689 aaPredicted RBP9.45□□□□□ -0.9
SPTA1-205ENST00000481212 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
SPTA1-205ENST00000481212 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 FBXO11Q86XK2 927 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 PLVAPQ9BX97 442 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 NRSN2Q9GZP1 204 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 KRT82Q9NSB4 513 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 TNS3Q68CZ2 1445 aa9.45□□□□□ -0.9
SPTA1-205ENST00000481212 A0A0A0MRY4 1105 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 TM4SF5O14894 197 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 CILPO75339 1184 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 ECEL1O95672 775 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
SPTA1-205ENST00000481212 PTPN11Q06124 597 aaPredicted RBP9.44□□□□□ -0.9
SPTA1-205ENST00000481212 TRIM28Q13263 835 aaKnown RBP9.44□□□□□ -0.9
SPTA1-205ENST00000481212 MPP2Q14168 576 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 PDE3AQ14432 1141 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 EZH2Q15910 746 aaKnown RBP9.44□□□□□ -0.9
SPTA1-205ENST00000481212 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
SPTA1-205ENST00000481212 SEZ6Q53EL9 994 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
SPTA1-205ENST00000481212 SLITRK4Q8IW52 837 aa9.44□□□□□ -0.9
SPTA1-205ENST00000481212 FBXO27Q8NI29 283 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms