RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SEMA6BQ9H3T3 888 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 PCDHB10Q9UN67 800 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
UPF3A-207ENST00000481131 TLDC2A0PJX2 215 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 DYNC1LI2O43237 492 aaPredicted RBP7.81□□□□□ -1.16
UPF3A-207ENST00000481131 NRG1Q02297 640 aaPredicted RBP7.81□□□□□ -1.16
UPF3A-207ENST00000481131 SGO2Q562F6 1265 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.81□□□□□ -1.16
UPF3A-207ENST00000481131 ARMCX6Q7L4S7 300 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
UPF3A-207ENST00000481131 FAM178BQ8IXR5 827 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 TMEM192Q8IY95 271 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 DZIP1LQ8IYY4 767 aaKnown RBP7.81□□□□□ -1.16
UPF3A-207ENST00000481131 KCT2Q8NC54 265 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 KLHL6Q8WZ60 621 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 NACC1Q96RE7 527 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 SSBP4Q9BWG4 385 aaPredicted RBP7.81□□□□□ -1.16
UPF3A-207ENST00000481131 SEMA6CQ9H3T2 930 aa7.81□□□□□ -1.16
UPF3A-207ENST00000481131 RGS13O14921 159 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 SART1O43290 800 aaKnown RBP7.8□□□□□ -1.16
UPF3A-207ENST00000481131 TXNRD3Q86VQ6 643 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 PHACTR4Q8IZ21 702 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 ARMC10Q8N2F6 343 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 BAHD1Q8TBE0 780 aaPredicted RBP7.8□□□□□ -1.16
UPF3A-207ENST00000481131 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 PPP1R13LQ8WUF5 828 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 CYB5D2Q8WUJ1 264 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 FBLIM1Q8WUP2 373 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 FOXQ1Q9C009 403 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 SSU72Q9NP77 194 aaKnown RBP7.8□□□□□ -1.16
UPF3A-207ENST00000481131 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
UPF3A-207ENST00000481131 MRPL42Q9Y6G3 142 aaKnown RBP7.8□□□□□ -1.16
UPF3A-207ENST00000481131 RBAK-RBAKDNI3L0D1 243 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 PDPK1O15530 556 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 GAS2O43903 313 aaKnown RBP7.79□□□□□ -1.16
UPF3A-207ENST00000481131 DDAH1O94760 285 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 NFICP08651 508 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 USP11P51784 963 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 SEZ6L2Q6UXD5 910 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 PPFIBP1Q86W92 1011 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 EZH1Q92800 747 aaPredicted RBP7.79□□□□□ -1.16
UPF3A-207ENST00000481131 CCDC74BQ96LY2 380 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 KRTAP4-8Q9BYQ9 185 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 PHAXQ9H814 394 aaKnown RBP7.79□□□□□ -1.16
UPF3A-207ENST00000481131 LGR6Q9HBX8 967 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 ZNF214Q9UL59 606 aaPredicted RBP7.79□□□□□ -1.16
UPF3A-207ENST00000481131 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
UPF3A-207ENST00000481131 DAGLAQ9Y4D2 1042 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 SLC12A7Q9Y666 1083 aa7.79□□□□□ -1.16
UPF3A-207ENST00000481131 DYRK3O43781 588 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 LRIG2O94898 1065 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 CCNFP41002 786 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 RASGRF1Q13972 1273 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 VHLLQ6RSH7 139 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 MYRFLQ96LU7 910 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 SLC6A18Q96N87 628 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 DNAJC7Q99615 494 aa7.78□□□□□ -1.16
UPF3A-207ENST00000481131 COL17A1Q9UMD9 1497 aaPredicted RBP7.78□□□□□ -1.16
UPF3A-207ENST00000481131 BMP3P12645 472 aa7.77□□□□□ -1.17
UPF3A-207ENST00000481131 UVSSAQ2YD98 709 aa7.77□□□□□ -1.17
UPF3A-207ENST00000481131 SDE2Q6IQ49 451 aa7.77□□□□□ -1.17
UPF3A-207ENST00000481131 DNAJB8Q8NHS0 232 aa7.77□□□□□ -1.17
UPF3A-207ENST00000481131 UTP4Q969X6 686 aaKnown RBP7.77□□□□□ -1.17
UPF3A-207ENST00000481131 RNPC3Q96LT9 517 aaKnown RBP7.77□□□□□ -1.17
UPF3A-207ENST00000481131 KANSL2Q9H9L4 492 aa7.77□□□□□ -1.17
UPF3A-207ENST00000481131 C9IYK1 514 aa7.76□□□□□ -1.17
UPF3A-207ENST00000481131 SLITRK5O94991 958 aa7.76□□□□□ -1.17
UPF3A-207ENST00000481131 PMS1P54277 932 aaKnown RBP7.76□□□□□ -1.17
UPF3A-207ENST00000481131 TDRD10Q5VZ19 366 aaKnown RBP7.76□□□□□ -1.17
UPF3A-207ENST00000481131 KIAA1211LQ6NV74 962 aa7.76□□□□□ -1.17
UPF3A-207ENST00000481131 FAM20CQ8IXL6 584 aa7.76□□□□□ -1.17
UPF3A-207ENST00000481131 LILRB2Q8N423 598 aa7.76□□□□□ -1.17
UPF3A-207ENST00000481131 MFSD2AQ8NA29 543 aa7.76□□□□□ -1.17
UPF3A-207ENST00000481131 RIN3Q8TB24 985 aa7.76□□□□□ -1.17
UPF3A-207ENST00000481131 SUCOQ9UBS9 1254 aaKnown RBP7.76□□□□□ -1.17
UPF3A-207ENST00000481131 MAP4P27816 1152 aaKnown RBP7.75□□□□□ -1.17
UPF3A-207ENST00000481131 GBP1P32455 592 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 SLC7A5Q01650 507 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 CDK5R2Q13319 367 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 NCAPHQ15003 741 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 GNPTABQ3T906 1256 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 SPATC1Q76KD6 591 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 TP53INP1Q96A56 240 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 C1GALT1Q9NS00 363 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 FAM86C1Q9NVL1 165 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 SUSD2Q9UGT4 822 aa7.75□□□□□ -1.17
UPF3A-207ENST00000481131 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
UPF3A-207ENST00000481131 LETMD1Q6P1Q0 360 aa7.74□□□□□ -1.17
UPF3A-207ENST00000481131 VWCEQ96DN2 955 aa7.74□□□□□ -1.17
UPF3A-207ENST00000481131 ZNF512BQ96KM6 892 aaPredicted RBP7.74□□□□□ -1.17
UPF3A-207ENST00000481131 DHRS1Q96LJ7 313 aa7.74□□□□□ -1.17
UPF3A-207ENST00000481131 MIPEPQ99797 713 aa7.74□□□□□ -1.17
UPF3A-207ENST00000481131 CEP131Q9UPN4 1083 aa7.74□□□□□ -1.17
UPF3A-207ENST00000481131 SUSD5O60279 629 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 CLEC3AO75596 197 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 TP53P04637 393 aaPredicted RBP7.73□□□□□ -1.17
UPF3A-207ENST00000481131 RXRBP28702 533 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 MAP7Q14244 749 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 TCEAL1Q15170 157 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms