RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 BAG3O95817 575 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 PLCG2P16885 1265 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 SHMT1P34896 483 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 PLCD1P51178 756 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 ZYXQ15942 572 aaKnown RBP11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 CCDC158Q5M9N0 1113 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 CRACR2BQ8N4Y2 399 aaPredicted RBP11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 MAGEB6Q8N7X4 407 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 SOCS4Q8WXH5 440 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 RIOK1Q9BRS2 568 aaKnown RBP11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 TMOD4Q9NZQ9 345 aa11.39□□□□□ -0.59
GTF3C2-210ENST00000480989 VCANP13611 3396 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 A0A1W2PRG0 241 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 ZKSCAN1P17029 563 aaPredicted RBP11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 VCAM1P19320 739 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 MAPK4P31152 587 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 GABPAQ06546 454 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 KIAA1755Q5JYT7 1200 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 CEP85Q6P2H3 762 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 PLEKHH3Q7Z736 793 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 TRPV1Q8NER1 839 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 NPLOC4Q8TAT6 608 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 APBA2Q99767 749 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 NOL10Q9BSC4 688 aaKnown RBP11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 GINM1Q9NU53 330 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 BAZ2AQ9UIF9 1905 aaKnown RBP11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 PRUNE2Q8WUY3 3088 aa11.38□□□□□ -0.59
GTF3C2-210ENST00000480989 COL11A1P12107 1806 aaPredicted RBP11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 MYH8P13535 1937 aa11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 SPDYE16A6NNV3 312 aaPredicted RBP11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 IDH1O75874 414 aaKnown RBP11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 MAP2K5Q13163 448 aa11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 LRIT3Q3SXY7 679 aa11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 CATSPERGQ6ZRH7 1159 aa11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 EHD4Q9H223 541 aa11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 SPTBN5Q9NRC6 3674 aaKnown RBP11.37□□□□□ -0.59
GTF3C2-210ENST00000480989 CHGBP05060 677 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 HLA-DOAP06340 250 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 RGS2P41220 211 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 OS9Q13438 667 aaPredicted RBP11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 GRB14Q14449 540 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 LBX2Q6XYB7 198 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 TDHQ8IZJ6 230 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 SLC17A8Q8NDX2 589 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 KIAA1683Q9H0B3 1180 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 MTMR10Q9NXD2 777 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 SERPINB13Q9UIV8 391 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 RABGAP1Q9Y3P9 1069 aa11.36□□□□□ -0.59
GTF3C2-210ENST00000480989 ZNFX1Q9P2E3 1918 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 DLL1O00548 723 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 HOXC6P09630 235 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 CYP2D6P10635 497 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 PTPREP23469 700 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP5P45974 858 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 SEPT2Q15019 361 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 CLEC10AQ8IUN9 316 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 SIAH1Q8IUQ4 282 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 DEFB123Q8N688 67 aa11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 EDC3Q96F86 508 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-210ENST00000480989 IGSF3O75054 1194 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 CYBAP13498 195 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 CYP2C19P33261 490 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 PDE3AQ14432 1141 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 ABCB5Q2M3G0 1257 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 CERKLQ49MI3 558 aaPredicted RBP11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 ITPRIPQ8IWB1 547 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 FEZ1Q99689 392 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 UBE2OQ9C0C9 1292 aaKnown RBP11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 SMCHD1A6NHR9 2005 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 MYH7P12883 1935 aa11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 GREB1LQ9C091 1923 aaPredicted RBP11.34□□□□□ -0.59
GTF3C2-210ENST00000480989 SLC15A5A6NIM6 579 aa11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 COBLO75128 1261 aa11.33□□□□□ -0.6
GTF3C2-210ENST00000480989 PDE6AP16499 860 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms