RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 NUP133Q8WUM0 1156 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 MYL10Q9BUA6 226 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 MYH6P13533 1939 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 EGFRP00533 1210 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 IFNAR1P17181 557 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 CDC27P30260 824 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 KIF5BP33176 963 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 ADD1P35611 737 aaKnown RBP17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 RAB11FIP4Q86YS3 637 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 PNMA1Q8ND90 353 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
SNRNP200-205ENST00000480835 DDNO94850 711 aaPredicted RBP17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 RXRAP19793 462 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 MAP3K10Q02779 954 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 RASA3Q14644 834 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 NTRK3Q16288 839 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 HOOK2Q96ED9 719 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 DDX11Q96FC9 970 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 CEP95Q96GE4 821 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 TMEM47Q9BQJ4 181 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 ORC3Q9UBD5 711 aaPredicted RBP17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 PGAP2Q9UHJ9 254 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 STX8Q9UNK0 236 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 ZDHHC9Q9Y397 364 aa17.24■□□□□ 0.35
SNRNP200-205ENST00000480835 PITPNM2Q9BZ72 1349 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 TTLL1O95922 423 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 EPS15P42566 896 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 GNAQP50148 359 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 SSRP1Q08945 709 aaKnown RBP17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 PKP1Q13835 747 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 CLEC17AQ6ZS10 378 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 WASF1Q92558 559 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 L3MBTL3Q96JM7 780 aaPredicted RBP17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 TMEM39BQ9GZU3 492 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 CABP5Q9NP86 173 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
SNRNP200-205ENST00000480835 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 FDPSP14324 419 aaKnown RBP17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 GRM4Q14833 912 aa17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 TRIM22Q8IYM9 498 aa17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 KANSL2Q9H9L4 492 aa17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 NYAP2Q9P242 653 aa17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 MTMR6Q9Y217 621 aa17.22■□□□□ 0.35
SNRNP200-205ENST00000480835 SCN4AP35499 1836 aa17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 FAM196BA6NMK8 535 aa17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 FMNL1O95466 1100 aaPredicted RBP17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 TEPSINQ96N21 525 aa17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 RNF26Q9BY78 433 aaPredicted RBP17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 GINM1Q9NU53 330 aa17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 ATP6V1DQ9Y5K8 247 aa17.21■□□□□ 0.35
SNRNP200-205ENST00000480835 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 H3BQV1 296 aa17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 AKAP17AQ02040 695 aaKnown RBP17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 ANGEL2Q5VTE6 544 aaKnown RBP17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 DEFB129Q9H1M3 183 aa17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 SYNPO2Q9UMS6 1093 aa17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
SNRNP200-205ENST00000480835 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 DEXIO95424 95 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 F13A1P00488 732 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 DCAF15Q66K64 600 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 MKL1Q969V6 931 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 SLC26A6Q9BXS9 759 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 GGA3Q9NZ52 723 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 CLIP2Q9UDT6 1046 aa17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 ASTN2O75129 1339 aaPredicted RBP17.19■□□□□ 0.34
SNRNP200-205ENST00000480835 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 PRPF3O43395 683 aaKnown RBP17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 DTNBO60941 627 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 GDF11O95390 407 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 SLURP2P0DP57 97 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 SMARCA1P28370 1054 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 ICA1Q05084 483 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 FUT2Q10981 343 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 USP50Q70EL3 339 aaPredicted RBP17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 PHKBQ93100 1093 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms