RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 FEZ1Q99689 392 aa13.87□□□□□ -0.19
TTC28-206ENST00000480563 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
TTC28-206ENST00000480563 SHHQ15465 462 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 TTC39AQ5SRH9 613 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 CATSPERGQ6ZRH7 1159 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 TRMT2AQ8IZ69 625 aaKnown RBP13.86□□□□□ -0.19
TTC28-206ENST00000480563 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 NPLOC4Q8TAT6 608 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 SEMA6BQ9H3T3 888 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 IVNS1ABPQ9Y6Y0 642 aa13.86□□□□□ -0.19
TTC28-206ENST00000480563 CYP2E1P05181 493 aaPredicted RBP13.85□□□□□ -0.19
TTC28-206ENST00000480563 DYNLL1P63167 89 aaKnown RBP13.85□□□□□ -0.19
TTC28-206ENST00000480563 GRB14Q14449 540 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 CCDC158Q5M9N0 1113 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 C9orf50Q5SZB4 431 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 GJC2Q5T442 439 aaPredicted RBP13.85□□□□□ -0.19
TTC28-206ENST00000480563 TATDN1Q6P1N9 297 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 SLC39A5Q6ZMH5 540 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 ARRDC4Q8NCT1 418 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
TTC28-206ENST00000480563 BTBD7Q9P203 1132 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 SIPA1L1O43166 1804 aa13.85□□□□□ -0.19
TTC28-206ENST00000480563 PNMA6EA0A0J9YXQ4 647 aa13.84□□□□□ -0.19
TTC28-206ENST00000480563 USP14P54578 494 aa13.84□□□□□ -0.19
TTC28-206ENST00000480563 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
TTC28-206ENST00000480563 LBX2Q6XYB7 198 aa13.84□□□□□ -0.19
TTC28-206ENST00000480563 ACER1Q8TDN7 264 aa13.84□□□□□ -0.19
TTC28-206ENST00000480563 ARHGAP45Q92619 1136 aa13.84□□□□□ -0.19
TTC28-206ENST00000480563 KIAA1683Q9H0B3 1180 aa13.84□□□□□ -0.19
TTC28-206ENST00000480563 PRDM5Q9NQX1 630 aaPredicted RBP13.84□□□□□ -0.19
TTC28-206ENST00000480563 IGHA2P01877 340 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 GNAI2P04899 355 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 CYBAP13498 195 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 VCAM1P19320 739 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 CYP7A1P22680 504 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 DPP9Q86TI2 863 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 MYLIPQ8WY64 445 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 BADQ92934 168 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 DBNDD2Q9BQY9 259 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 GPR108Q9NPR9 543 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 PRDM6Q9NQX0 595 aa13.83□□□□□ -0.2
TTC28-206ENST00000480563 KBTBD13C9JR72 458 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 IGSF3O75054 1194 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
TTC28-206ENST00000480563 ZAP70P43403 619 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 USP5P45974 858 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
TTC28-206ENST00000480563 SMAD3P84022 425 aaKnown RBP13.82□□□□□ -0.2
TTC28-206ENST00000480563 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
TTC28-206ENST00000480563 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 ANO1Q5XXA6 986 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 TTYH1Q9H313 450 aaPredicted RBP13.82□□□□□ -0.2
TTC28-206ENST00000480563 RPAP3Q9H6T3 665 aaPredicted RBP13.82□□□□□ -0.2
TTC28-206ENST00000480563 PIH1D3Q9NQM4 214 aaKnown RBP13.82□□□□□ -0.2
TTC28-206ENST00000480563 SERPINB13Q9UIV8 391 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
TTC28-206ENST00000480563 DNAH12Q6ZR08 3092 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
TTC28-206ENST00000480563 STRNO43815 780 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 ADORA2AP29274 412 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 TRIM60Q495X7 471 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 ZNF512BQ96KM6 892 aaPredicted RBP13.81□□□□□ -0.2
TTC28-206ENST00000480563 EHD4Q9H223 541 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 CABP5Q9NP86 173 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 LAMA2P24043 3122 aaKnown RBP13.81□□□□□ -0.2
TTC28-206ENST00000480563 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
TTC28-206ENST00000480563 TTC28Q96AY4 2481 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
TTC28-206ENST00000480563 SEPT4O43236 478 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 FOSL2P15408 326 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 ADCYAP1R1P41586 468 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 COG2Q14746 738 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 SNX17Q15036 470 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 MIGA1Q8NAN2 632 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 FERMT2Q96AC1 680 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 MOV10L1Q9BXT6 1211 aaKnown RBP13.8□□□□□ -0.2
TTC28-206ENST00000480563 PDLIM7Q9NR12 457 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 HOXC10Q9NYD6 342 aa13.8□□□□□ -0.2
TTC28-206ENST00000480563 TRIM43BA6NCK2 446 aa13.79□□□□□ -0.2
TTC28-206ENST00000480563 IDH1O75874 414 aaKnown RBP13.79□□□□□ -0.2
TTC28-206ENST00000480563 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
TTC28-206ENST00000480563 PRAMEF19Q5SWL8 479 aa13.79□□□□□ -0.2
TTC28-206ENST00000480563 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
TTC28-206ENST00000480563 SYMPKQ92797 1274 aaKnown RBP13.79□□□□□ -0.2
TTC28-206ENST00000480563 TRIM43Q96BQ3 446 aaPredicted RBP13.79□□□□□ -0.2
TTC28-206ENST00000480563 FRMPD3Q5JV73 1810 aa13.78□□□□□ -0.2
TTC28-206ENST00000480563 IPO8O15397 1037 aaKnown RBP13.78□□□□□ -0.2
TTC28-206ENST00000480563 COBLO75128 1261 aa13.78□□□□□ -0.2
TTC28-206ENST00000480563 ERCC3P19447 782 aa13.78□□□□□ -0.2
TTC28-206ENST00000480563 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
TTC28-206ENST00000480563 SHMT1P34896 483 aa13.78□□□□□ -0.2
TTC28-206ENST00000480563 PLCD1P51178 756 aa13.78□□□□□ -0.2
TTC28-206ENST00000480563 TLE2Q04725 743 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms