RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 THSD4Q6ZMP0 1018 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 UBE3BQ7Z3V4 1068 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 TTLL11Q8NHH1 800 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 DNAAF4Q8WXU2 420 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 PBXIP1Q96AQ6 731 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 MPHOSPH8Q99549 860 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 HNRNPABQ99729 332 aaKnown RBP10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 ANKRD2Q9GZV1 360 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 NKX2-4Q9H2Z4 354 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 ATP11BQ9Y2G3 1177 aa10.38□□□□□ -0.75
EFEMP1-211ENST00000480016 PDHXO00330 501 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 TNPO2O14787 897 aaKnown RBP10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 MMP14P50281 582 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 VGLL4Q14135 290 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 GCKRQ14397 625 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 CWF19L2Q2TBE0 894 aaKnown RBP10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 KRT40Q6A162 431 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 ANKRD23Q86SG2 305 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 OGFOD1Q8N543 542 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 LINS1Q8NG48 757 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 NKD2Q969F2 451 aaPredicted RBP10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 GREM2Q9H772 168 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 SLC28A3Q9HAS3 691 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 MINPP1Q9UNW1 487 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 LEMD3Q9Y2U8 911 aa10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 SALL2Q9Y467 1007 aaPredicted RBP10.37□□□□□ -0.75
EFEMP1-211ENST00000480016 FANCIQ9NVI1 1328 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 ZNF462Q96JM2 2506 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 RFXAPO00287 272 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 TULP1O00294 542 aaPredicted RBP10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 IRF6O14896 467 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 KCNJ4P48050 445 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 CCT4P50991 539 aaKnown RBP10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 G2E3Q7L622 706 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 PLA2G12BQ9BX93 195 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 COA1Q9GZY4 146 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 PPP2R3BQ9Y5P8 575 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 MED23Q9ULK4 1368 aa10.36□□□□□ -0.75
EFEMP1-211ENST00000480016 CACNA1FO60840 1977 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 MYO3BQ8WXR4 1341 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 PSME4Q14997 1843 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 ANKRD18BA2A2Z9 1011 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 MAP3K7O43318 606 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 VAMP4O75379 141 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 ITGA6P23229 1130 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 EXOSC9Q06265 439 aaKnown RBP10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 RASIP1Q5U651 963 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 SUGP1Q8IWZ8 645 aaKnown RBP10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 MXD3Q9BW11 206 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 KCNH4Q9UQ05 1017 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 JAG2Q9Y219 1238 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 YBX2Q9Y2T7 364 aaKnown RBP10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 MYH3P11055 1940 aa10.35□□□□□ -0.75
EFEMP1-211ENST00000480016 AOX1Q06278 1338 aa10.34□□□□□ -0.75
EFEMP1-211ENST00000480016 VCPP55072 806 aaKnown RBP10.34□□□□□ -0.75
EFEMP1-211ENST00000480016 STRIP1Q5VSL9 837 aa10.34□□□□□ -0.75
EFEMP1-211ENST00000480016 FBXL6Q8N531 539 aa10.34□□□□□ -0.75
EFEMP1-211ENST00000480016 ZNF804BA4D1E1 1349 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 CSF1RP07333 972 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 IFIT5Q13325 482 aaKnown RBP10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 RAB30Q15771 203 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 LEXMQ3ZCV2 418 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 TAF7LQ5H9L4 462 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 FAM9BQ8IZU0 186 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 EDAQ92838 391 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 COL4A1P02462 1669 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 SPEGQ15772 3267 aa10.33□□□□□ -0.76
EFEMP1-211ENST00000480016 ANKRD17O75179 2603 aaKnown RBP10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 TMEM221A6NGB7 291 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 M0R296 226 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 CYP2C8P10632 490 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 AVPR2P30518 371 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 FPGSQ05932 587 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 CCDC57Q2TAC2 916 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 HERC4Q5GLZ8 1057 aaPredicted RBP10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 SLC39A5Q6ZMH5 540 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 FRMD5Q7Z6J6 570 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 KIAA2013Q8IYS2 634 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 C9orf78Q9NZ63 289 aaPredicted RBP10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 GJD2Q9UKL4 321 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 ZZEF1O43149 2961 aa10.32□□□□□ -0.76
EFEMP1-211ENST00000480016 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
EFEMP1-211ENST00000480016 ADRB1P08588 477 aa10.31□□□□□ -0.76
EFEMP1-211ENST00000480016 CASP7P55210 303 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms