RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 FSD1Q9BTV5 496 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
DDX56-211ENST00000479602 EHD4Q9H223 541 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 CUL9Q8IWT3 2517 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 PTPRFP10586 1907 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 TNPO2O14787 897 aaKnown RBP10.67□□□□□ -0.7
DDX56-211ENST00000479602 INHAP05111 366 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 ELNP15502 786 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 CYP7A1P22680 504 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 HMGCS2P54868 508 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 ALX1Q15699 326 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 MAP3K21Q5TCX8 1036 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 TATDN1Q6P1N9 297 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 TEX11Q8IYF3 940 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 EDC3Q96F86 508 aaKnown RBP10.67□□□□□ -0.7
DDX56-211ENST00000479602 P2RX7Q99572 595 aaKnown RBP10.67□□□□□ -0.7
DDX56-211ENST00000479602 NOL10Q9BSC4 688 aaKnown RBP10.67□□□□□ -0.7
DDX56-211ENST00000479602 RBM27Q9P2N5 1060 aaKnown RBP10.67□□□□□ -0.7
DDX56-211ENST00000479602 RBPJLQ9UBG7 517 aa10.67□□□□□ -0.7
DDX56-211ENST00000479602 FLT1P17948 1338 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 SIPA1L1O43166 1804 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 C19orf81C9J6K1 198 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 IGHA2P01877 340 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 SHROOM1Q2M3G4 852 aaPredicted RBP10.66□□□□□ -0.7
DDX56-211ENST00000479602 Q3C1V9 767 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 SMCR8Q8TEV9 937 aaPredicted RBP10.66□□□□□ -0.7
DDX56-211ENST00000479602 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 RUFY2Q8WXA3 655 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 OSBP2Q969R2 916 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 STRBPQ96SI9 672 aaKnown RBP10.66□□□□□ -0.7
DDX56-211ENST00000479602 CRNKL1Q9BZJ0 848 aaKnown RBP10.66□□□□□ -0.7
DDX56-211ENST00000479602 TXNRD2Q9NNW7 524 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 EMILIN3Q9NT22 766 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 AATFQ9NY61 560 aaKnown RBP eCLIP10.66□□□□□ -0.7
DDX56-211ENST00000479602 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 COL6A3P12111 3177 aa10.66□□□□□ -0.7
DDX56-211ENST00000479602 MYH1P12882 1939 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 MAGEB6P1A0A0J9YX57 407 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 ASNSP08243 561 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 PCP11498 1178 aaKnown RBP10.65□□□□□ -0.7
DDX56-211ENST00000479602 XRCC5P13010 732 aaKnown RBP10.65□□□□□ -0.7
DDX56-211ENST00000479602 CHMLP26374 656 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 MCMDC2Q4G0Z9 681 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 SBK1Q52WX2 424 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 DPF3Q92784 378 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 COA7Q96BR5 231 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 DEFB118Q96PH6 123 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 HTATIP2Q9BUP3 242 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 PUS7LQ9H0K6 701 aaKnown RBP10.65□□□□□ -0.7
DDX56-211ENST00000479602 PALD1Q9ULE6 856 aa10.65□□□□□ -0.7
DDX56-211ENST00000479602 CCDC171Q6TFL3 1326 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 SGSM2O43147 1006 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 GPAA1O43292 621 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 CDC45O75419 566 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 FARP2O94887 1054 aaPredicted RBP10.64□□□□□ -0.71
DDX56-211ENST00000479602 DYNLL1P63167 89 aaKnown RBP10.64□□□□□ -0.71
DDX56-211ENST00000479602 TRIM32Q13049 653 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 PABPC4Q13310 644 aaKnown RBP eCLIP10.64□□□□□ -0.712e-6■■□□□ 12.6
DDX56-211ENST00000479602 MAPKAPK5Q8IW41 473 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 ANKLE1Q8NAG6 615 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 C12orf42Q96LP6 360 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 AS3MTQ9HBK9 375 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 DCP1AQ9NPI6 582 aaPredicted RBP10.64□□□□□ -0.71
DDX56-211ENST00000479602 ARPP21Q9UBL0 812 aaPredicted RBP10.64□□□□□ -0.71
DDX56-211ENST00000479602 BIN2Q9UBW5 565 aaPredicted RBP10.64□□□□□ -0.71
DDX56-211ENST00000479602 OGDHLQ9ULD0 1010 aa10.64□□□□□ -0.71
DDX56-211ENST00000479602 RPTORQ8N122 1335 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 GREB1LQ9C091 1923 aaPredicted RBP10.63□□□□□ -0.71
DDX56-211ENST00000479602 A0A0D9SFI3 127 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 A0A1W2PPC1 479 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 TRIM6-TRIM34B2RNG4 842 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 FOXP2O15409 715 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 PEX10O60683 326 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 MBD4O95243 580 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 HMGCRP04035 888 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 HERVK_113P62684 666 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 GABPAQ06546 454 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 MTMR2Q13614 643 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 MORN1Q5T089 497 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 LBX2Q6XYB7 198 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 LCORLQ8N3X6 602 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 TRIB2Q92519 343 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 PAWRQ96IZ0 340 aaKnown RBP10.63□□□□□ -0.71
DDX56-211ENST00000479602 DIAPH3Q9NSV4 1193 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 ANAPC4Q9UJX5 808 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 ZBTB21Q9ULJ3 1066 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 MGAMO43451 1857 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 DOCK1Q14185 1865 aa10.63□□□□□ -0.71
DDX56-211ENST00000479602 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 CNMDO75829 334 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 TFRCP02786 760 aaKnown RBP10.62□□□□□ -0.71
DDX56-211ENST00000479602 FGRP09769 529 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 COL6A1P12109 1028 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 GUCY1A2P33402 732 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms