RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 USP17L13C9JLJ4 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L11C9JVI0 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L18D6R9N7 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L22D6RA61 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L17D6RBQ6 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L19D6RCP7 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L20D6RJB6 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 MPHOSPH10O00566 681 aaKnown RBP17.28■□□□□ 0.36
ATG4B-218ENST00000479554 PEX10O60683 326 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 HMGCRP04035 888 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 CYP2D6P10635 497 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 ERVK-9P63128 1117 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 ERVK-24P63145 666 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 USP17L24Q0WX57 530 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 UBE3CQ15386 1083 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 ZSCAN25Q6NSZ9 544 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 ACER1Q8TDN7 264 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 RBPJLQ9UBG7 517 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 GJD2Q9UKL4 321 aa17.28■□□□□ 0.36
ATG4B-218ENST00000479554 PRKAB2O43741 272 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 SGPL1O95470 568 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 VCAM1P19320 739 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 MAPK4P31152 587 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 GUCY1A2P33402 732 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 SEPT2Q15019 361 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 CCAR1Q8IX12 1150 aaKnown RBP17.27■□□□□ 0.36
ATG4B-218ENST00000479554 AMOTL1Q8IY63 956 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 GPATCH3Q96I76 525 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 SWAP70Q9UH65 585 aa17.27■□□□□ 0.36
ATG4B-218ENST00000479554 PLXNB2O15031 1838 aa17.26■□□□□ 0.35
ATG4B-218ENST00000479554 FARP2O94887 1054 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-218ENST00000479554 CHGBP05060 677 aa17.26■□□□□ 0.35
ATG4B-218ENST00000479554 UBE2Q1Q7Z7E8 422 aa17.26■□□□□ 0.35
ATG4B-218ENST00000479554 SLC44A5Q8NCS7 719 aa17.26■□□□□ 0.35
ATG4B-218ENST00000479554 DEFB118Q96PH6 123 aa17.26■□□□□ 0.35
ATG4B-218ENST00000479554 NUDT12Q9BQG2 462 aa17.26■□□□□ 0.35
ATG4B-218ENST00000479554 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
ATG4B-218ENST00000479554 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
ATG4B-218ENST00000479554 PAK6Q9NQU5 681 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-218ENST00000479554 MYH8P13535 1937 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 TFRCP02786 760 aaKnown RBP17.25■□□□□ 0.35
ATG4B-218ENST00000479554 CAPN2P17655 700 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 CYP2B6P20813 491 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 TMEM179Q6ZVK1 233 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 DPF3Q92784 378 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 DYNLL2Q96FJ2 89 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 HTATIP2Q9BUP3 242 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■■■□□ 19.1
ATG4B-218ENST00000479554 PORCNQ9H237 461 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-218ENST00000479554 RABGAP1Q9Y3P9 1069 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 SLC4A4Q9Y6R1 1079 aa17.25■□□□□ 0.35
ATG4B-218ENST00000479554 BAZ2AQ9UIF9 1905 aaKnown RBP17.25■□□□□ 0.35
ATG4B-218ENST00000479554 Q3C1V9 767 aa17.24■□□□□ 0.35
ATG4B-218ENST00000479554 POTEEQ6S8J3 1075 aa17.24■□□□□ 0.35
ATG4B-218ENST00000479554 GPR142Q7Z601 462 aa17.24■□□□□ 0.35
ATG4B-218ENST00000479554 TRIB2Q92519 343 aa17.24■□□□□ 0.35
ATG4B-218ENST00000479554 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
ATG4B-218ENST00000479554 CNMDO75829 334 aa17.23■□□□□ 0.35
ATG4B-218ENST00000479554 CCNA1P78396 465 aa17.23■□□□□ 0.35
ATG4B-218ENST00000479554 TRIM32Q13049 653 aa17.23■□□□□ 0.35
ATG4B-218ENST00000479554 C12orf60Q5U649 245 aa17.23■□□□□ 0.35
ATG4B-218ENST00000479554 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
ATG4B-218ENST00000479554 PLEKHH3Q7Z736 793 aa17.23■□□□□ 0.35
ATG4B-218ENST00000479554 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
ATG4B-218ENST00000479554 HMX1Q9NP08 348 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-218ENST00000479554 RPTORQ8N122 1335 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 CYP2D7A0A087X1C5 515 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-218ENST00000479554 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 USP17L21D6R901 530 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 H0YGN5 161 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
ATG4B-218ENST00000479554 AKR1B1P15121 316 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 ZKSCAN1P17029 563 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-218ENST00000479554 RGS2P41220 211 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 HABP4Q5JVS0 413 aaKnown RBP17.22■□□□□ 0.35
ATG4B-218ENST00000479554 WDR78Q5VTH9 848 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 LBX2Q6XYB7 198 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 TRMT44Q8IYL2 757 aaKnown RBP17.22■□□□□ 0.35
ATG4B-218ENST00000479554 KBTBD3Q8NAB2 608 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 CRISPLD2Q9H0B8 497 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 ARHGEF10LQ9HCE6 1279 aa17.22■□□□□ 0.35
ATG4B-218ENST00000479554 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
ATG4B-218ENST00000479554 CDK8P49336 464 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
ATG4B-218ENST00000479554 ICA1Q05084 483 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 MORN1Q5T089 497 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 USP6NLQ92738 828 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 CCDC17Q96LX7 622 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 APBA2Q99767 749 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 TANGO6Q9C0B7 1094 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
ATG4B-218ENST00000479554 ARPP21Q9UBL0 812 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms