RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 DEFB118Q96PH6 123 aa21.02■□□□□ 0.96
ECHDC1-216ENST00000479525 RBPJLQ9UBG7 517 aa21.02■□□□□ 0.96
ECHDC1-216ENST00000479525 CERS3Q8IU89 383 aa21.01■□□□□ 0.95
ECHDC1-216ENST00000479525 STK11IPQ8N1F8 1099 aa21.01■□□□□ 0.95
ECHDC1-216ENST00000479525 YTHDC1Q96MU7 727 aaKnown RBP21.01■□□□□ 0.95
ECHDC1-216ENST00000479525 CHMP4BQ9H444 224 aaKnown RBP21.01■□□□□ 0.95
ECHDC1-216ENST00000479525 CABP5Q9NP86 173 aa21.01■□□□□ 0.95
ECHDC1-216ENST00000479525 MORF4L1Q9UBU8 362 aa21.01■□□□□ 0.95
ECHDC1-216ENST00000479525 GJD2Q9UKL4 321 aa21.01■□□□□ 0.95
ECHDC1-216ENST00000479525 IRF5Q13568 498 aa21■□□□□ 0.95
ECHDC1-216ENST00000479525 PUS7LQ9H0K6 701 aaKnown RBP21■□□□□ 0.95
ECHDC1-216ENST00000479525 RLFQ13129 1914 aa21■□□□□ 0.95
ECHDC1-216ENST00000479525 COL11A1P12107 1806 aaPredicted RBP21■□□□□ 0.95
ECHDC1-216ENST00000479525 PARP14Q460N5 1801 aa21■□□□□ 0.95
ECHDC1-216ENST00000479525 A0A1W2PRG0 241 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 CNMDO75829 334 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 VCAM1P19320 739 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 ERVK-9P63128 1117 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 ERVK-24P63145 666 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 DPF3Q92784 378 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 GINM1Q9NU53 330 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 PCDHB15Q9Y5E8 787 aa20.99■□□□□ 0.95
ECHDC1-216ENST00000479525 H0YGN5 161 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 AKR1B1P15121 316 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 KIAA1755Q5JYT7 1200 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 WDR78Q5VTH9 848 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 SAMD1Q6SPF0 538 aaPredicted RBP20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 GPRC5AQ8NFJ5 357 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 PXYLP1Q8TE99 480 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 TRIB2Q92519 343 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 RPAP3Q9H6T3 665 aaPredicted RBP20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 FRMPD3Q5JV73 1810 aa20.98■□□□□ 0.95
ECHDC1-216ENST00000479525 FARP2O94887 1054 aaPredicted RBP20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 SGPL1O95470 568 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 TFRCP02786 760 aaKnown RBP20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 CCL14Q16627 93 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 OTUD7AQ8TE49 926 aaPredicted RBP20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 DIS3LQ8TF46 1054 aaKnown RBP20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.97■□□□□ 0.955e-9■■■■■ 28.9
ECHDC1-216ENST00000479525 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 PCDH10Q9P2E7 1040 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 SLC4A4Q9Y6R1 1079 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L15C9J2P7 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L13C9JLJ4 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L12C9JPN9 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L11C9JVI0 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L21D6R901 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L18D6R9N7 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L22D6RA61 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L17D6RBQ6 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L19D6RCP7 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L20D6RJB6 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 USP17L24Q0WX57 530 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 C12orf42Q96LP6 360 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 DCTPP1Q9H773 170 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 BTBD7Q9P203 1132 aa20.97■□□□□ 0.95
ECHDC1-216ENST00000479525 HMGCRP04035 888 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 HABP4Q5JVS0 413 aaKnown RBP20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 CATSPERGQ6ZRH7 1159 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 GPR142Q7Z601 462 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 UBE2Q1Q7Z7E8 422 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 CCAR1Q8IX12 1150 aaKnown RBP20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 NKX2-3Q8TAU0 364 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 KIAA1683Q9H0B3 1180 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 CWC22Q9HCG8 908 aaKnown RBP20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 ECHDC1Q9NTX5 307 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 CEP290O15078 2479 aa20.96■□□□□ 0.95
ECHDC1-216ENST00000479525 SPICE1Q8N0Z3 855 aa20.95■□□□□ 0.94
ECHDC1-216ENST00000479525 PAK6Q9NQU5 681 aaPredicted RBP20.95■□□□□ 0.94
ECHDC1-216ENST00000479525 COLQQ9Y215 455 aaPredicted RBP20.95■□□□□ 0.94
ECHDC1-216ENST00000479525 A0A0G2JMZ2 1700 aa20.95■□□□□ 0.94
ECHDC1-216ENST00000479525 SPDYE16A6NNV3 312 aaPredicted RBP20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 CDK8P49336 464 aa20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 USP14P54578 494 aa20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 ATP2B2Q01814 1243 aa20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 TMED8Q6PL24 325 aaPredicted RBP20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 CRBNQ96SW2 442 aa20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 NUDT12Q9BQG2 462 aa20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 MYH4Q9Y623 1939 aa20.94■□□□□ 0.94
ECHDC1-216ENST00000479525 ZNFX1Q9P2E3 1918 aaKnown RBP20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 UBE3CQ15386 1083 aa20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 C12orf60Q5U649 245 aa20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 CTR9Q6PD62 1173 aa20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 PLEKHH3Q7Z736 793 aa20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 PAWRQ96IZ0 340 aaKnown RBP20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 TANGO6Q9C0B7 1094 aa20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 ATP8A2Q9NTI2 1148 aa20.93■□□□□ 0.94
ECHDC1-216ENST00000479525 PRKAR2AP13861 404 aaKnown RBP20.92■□□□□ 0.94
ECHDC1-216ENST00000479525 SIAH1Q8IUQ4 282 aa20.92■□□□□ 0.94
ECHDC1-216ENST00000479525 OSBP2Q969R2 916 aa20.92■□□□□ 0.94
ECHDC1-216ENST00000479525 GREB1LQ9C091 1923 aaPredicted RBP20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 M0R2C6 588 aa20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 CCND3P30281 292 aaPredicted RBP20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 MAPK4P31152 587 aa20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 ICA1Q05084 483 aa20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 MORN1Q5T089 497 aa20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 CHRDL2Q6WN34 429 aa20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 TMEM179Q6ZVK1 233 aa20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 SEC62Q99442 399 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms