RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 ASB2Q96Q27 587 aa9.37□□□□□ -0.91
HMGCL-205ENST00000479458 LRRCC1Q9C099 1032 aa9.37□□□□□ -0.91
HMGCL-205ENST00000479458 GJD2Q9UKL4 321 aa9.37□□□□□ -0.91
HMGCL-205ENST00000479458 SUPT16HQ9Y5B9 1047 aaKnown RBP9.37□□□□□ -0.91
HMGCL-205ENST00000479458 RFX7Q2KHR2 1363 aa9.37□□□□□ -0.91
HMGCL-205ENST00000479458 AK9Q5TCS8 1911 aa9.37□□□□□ -0.91
HMGCL-205ENST00000479458 PLXNB2O15031 1838 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 DOCK2Q92608 1830 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 SMARCA5O60264 1052 aaPredicted RBP9.36□□□□□ -0.91
HMGCL-205ENST00000479458 XRCC5P13010 732 aaKnown RBP9.36□□□□□ -0.91
HMGCL-205ENST00000479458 INPP5BP32019 993 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 BTDP43251 543 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 NFIAQ12857 509 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 AAMPQ13685 434 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGCL-205ENST00000479458 PIH1D3Q9NQM4 214 aaKnown RBP9.36□□□□□ -0.91
HMGCL-205ENST00000479458 RAI14Q9P0K7 980 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 LRP2BPQ9P2M1 347 aa9.36□□□□□ -0.91
HMGCL-205ENST00000479458 GPR75-ASB3A0A0A6YYF3 556 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 IGSF3O75054 1194 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 LDHCP07864 332 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 TIE1P35590 1138 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 RHBDL3P58872 404 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 GSTO1P78417 241 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 SHHQ15465 462 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 AKNAD1Q5T1N1 836 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
HMGCL-205ENST00000479458 USP38Q8NB14 1042 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 EXOC6Q8TAG9 804 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 ADAMTS19Q8TE59 1207 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 UHRF1Q96T88 793 aaPredicted RBP9.35□□□□□ -0.91
HMGCL-205ENST00000479458 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 ANTXR1Q9H6X2 564 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 USP40Q9NVE5 1235 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 FAM198AQ9UFP1 575 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 NDUFB9Q9Y6M9 179 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 FRMPD3Q5JV73 1810 aa9.35□□□□□ -0.91
HMGCL-205ENST00000479458 PHIPQ8WWQ0 1821 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 STK25O00506 426 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 IDH1O75874 414 aaKnown RBP9.34□□□□□ -0.91
HMGCL-205ENST00000479458 ATP5JP18859 108 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 MRPS5P82675 430 aaKnown RBP9.34□□□□□ -0.91
HMGCL-205ENST00000479458 TCP10Q12799 353 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 HDAC1Q13547 482 aaPredicted RBP9.34□□□□□ -0.91
HMGCL-205ENST00000479458 LHX8Q68G74 356 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 NAA16Q6N069 864 aaPredicted RBP9.34□□□□□ -0.91
HMGCL-205ENST00000479458 FAM151AQ8WW52 585 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 IDI2Q9BXS1 227 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 THEGQ9P2T0 379 aa9.34□□□□□ -0.91
HMGCL-205ENST00000479458 RLFQ13129 1914 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 ENTPD3O75355 529 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 MAP4K4O95819 1239 aaPredicted RBP9.33□□□□□ -0.92
HMGCL-205ENST00000479458 GCLCP48506 637 aaPredicted RBP9.33□□□□□ -0.92
HMGCL-205ENST00000479458 RGS3P49796 1198 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 PPP4CP60510 307 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 ADGRA1Q86SQ6 560 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 ZFPM1Q8IX07 1006 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
HMGCL-205ENST00000479458 TRIB2Q92519 343 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 DNAJC2Q99543 621 aaKnown RBP9.33□□□□□ -0.92
HMGCL-205ENST00000479458 BOLA2Q9H3K6 86 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 DDX4Q9NQI0 724 aaKnown RBP9.33□□□□□ -0.92
HMGCL-205ENST00000479458 PRKAG2Q9UGJ0 569 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 PNMA3Q9UL41 463 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 AFG3L2Q9Y4W6 797 aa9.33□□□□□ -0.92
HMGCL-205ENST00000479458 GOLIM4O00461 696 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 CYP7A1P22680 504 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 TRIM32Q13049 653 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 TTF1Q15361 905 aaPredicted RBP9.32□□□□□ -0.92
HMGCL-205ENST00000479458 C9orf50Q5SZB4 431 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 MAGEB6Q8N7X4 407 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 EDC3Q96F86 508 aaKnown RBP9.32□□□□□ -0.92
HMGCL-205ENST00000479458 HAUS7Q99871 368 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 LRFN3Q9BTN0 628 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 ECHDC1Q9NTX5 307 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 AATFQ9NY61 560 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGCL-205ENST00000479458 AGTPBP1Q9UPW5 1226 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 ATRNL1Q5VV63 1379 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 CDK5RAP2Q96SN8 1893 aa9.32□□□□□ -0.92
HMGCL-205ENST00000479458 DDTLA6NHG4 134 aaPredicted RBP9.31□□□□□ -0.92
HMGCL-205ENST00000479458 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 BAG3O95817 575 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 PLCG2P16885 1265 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 PTPRAP18433 802 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 MAP3K10Q02779 954 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 PICALMQ13492 652 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 GRIN2CQ14957 1233 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 TMED8Q6PL24 325 aaPredicted RBP9.31□□□□□ -0.92
HMGCL-205ENST00000479458 MIGA2Q7L4E1 593 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 SH3BP5LQ7L8J4 393 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 TEX11Q8IYF3 940 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 ANKRD13CQ8N6S4 541 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 OTUD7AQ8TE49 926 aaPredicted RBP9.31□□□□□ -0.92
HMGCL-205ENST00000479458 SH3RF3Q8TEJ3 882 aaPredicted RBP9.31□□□□□ -0.92
HMGCL-205ENST00000479458 SOCS4Q8WXH5 440 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 NOL10Q9BSC4 688 aaKnown RBP9.31□□□□□ -0.92
HMGCL-205ENST00000479458 BMP2KQ9NSY1 1161 aaPredicted RBP9.31□□□□□ -0.92
HMGCL-205ENST00000479458 PAG1Q9NWQ8 432 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 STK24Q9Y6E0 443 aa9.31□□□□□ -0.92
HMGCL-205ENST00000479458 CACNA1AO00555 2505 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms