RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 A6NNZ2 444 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 PSMD14O00487 310 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 KRT14P02533 472 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 RWDD2BP57060 319 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 TUBB8Q3ZCM7 444 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 ZC3H12AQ5D1E8 599 aaKnown RBP23.86■■□□□ 1.41
SDF4-206ENST00000478938 TTLL7Q6ZT98 887 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 RASSF8Q8NHQ8 419 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 RSRC1Q96IZ7 334 aaKnown RBP23.86■■□□□ 1.41
SDF4-206ENST00000478938 NCAPD2Q15021 1401 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 SNUPNO95149 360 aaKnown RBP23.85■■□□□ 1.41
SDF4-206ENST00000478938 PPARDQ03181 441 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 C6orf89Q6UWU4 347 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 MLKLQ8NB16 471 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 JAKMIP2Q96AA8 810 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 AIDAQ96BJ3 306 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 PPP1R37O75864 691 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 STX17P56962 302 aa23.85■■□□□ 1.41
SDF4-206ENST00000478938 CKAP4Q07065 602 aaKnown RBP23.85■■□□□ 1.41
SDF4-206ENST00000478938 G3BP1Q13283 466 aaKnown RBP eCLIP23.85■■□□□ 1.41
SDF4-206ENST00000478938 SPDYE1Q8NFV5 336 aaPredicted RBP23.85■■□□□ 1.41
SDF4-206ENST00000478938 ADD3Q9UEY8 706 aaKnown RBP23.85■■□□□ 1.41
SDF4-206ENST00000478938 FECHP22830 423 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 SLC8A1P32418 973 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 POSTNQ15063 836 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 RIPOR2Q9Y4F9 1068 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 HSF2BPO75031 334 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 CDC25CP30307 473 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 PTPAQ15257 358 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 NBPF5PQ86XG9 351 aaPredicted RBP23.84■■□□□ 1.41
SDF4-206ENST00000478938 SLC39A2Q9NP94 309 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 ABHD10Q9NUJ1 306 aa23.84■■□□□ 1.41
SDF4-206ENST00000478938 C9orf78Q9NZ63 289 aaPredicted RBP23.84■■□□□ 1.41
SDF4-206ENST00000478938 DMGDHQ9UI17 866 aaKnown RBP23.84■■□□□ 1.41
SDF4-206ENST00000478938 MLH3Q9UHC1 1453 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 DRP2Q13474 957 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 RBBP5Q15291 538 aaKnown RBP23.83■■□□□ 1.41
SDF4-206ENST00000478938 KLHL10Q6JEL2 608 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 KDM7AQ6ZMT4 941 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 ZIM3Q96PE6 472 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 OSBPL7Q9BZF2 842 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 ACTR5Q9H9F9 607 aaPredicted RBP23.83■■□□□ 1.41
SDF4-206ENST00000478938 SEC31BQ9NQW1 1179 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 DLC1Q96QB1 1528 aa23.83■■□□□ 1.41
SDF4-206ENST00000478938 FAM237AA0A1B0GTK4 181 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 ATP2C2O75185 946 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 MORC3Q14149 939 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 PAPD7Q5XG87 772 aaKnown RBP23.83■■□□□ 1.4
SDF4-206ENST00000478938 CYP26C1Q6V0L0 522 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 SAAL1Q96ER3 474 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 RPGRIP1Q96KN7 1286 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 CHPF2Q9P2E5 772 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 DACH1Q9UI36 760 aa23.83■■□□□ 1.4
SDF4-206ENST00000478938 E7EVH7 732 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 E7EWF7 191 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 SLC7A5Q01650 507 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 KLHDC4Q8TBB5 520 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 AIFM3Q96NN9 605 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 CHP1Q99653 195 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 PPP6R2O75170 966 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 PLCD1P51178 756 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 MCMDC2Q4G0Z9 681 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 NSMCE1Q8WV22 266 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 CCDC51Q96ER9 411 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 STAMBPL1Q96FJ0 436 aa23.82■■□□□ 1.4
SDF4-206ENST00000478938 CSB-PGBD3P0DP91 1061 aa23.81■■□□□ 1.4
SDF4-206ENST00000478938 ARMC3Q5W041 872 aa23.81■■□□□ 1.4
SDF4-206ENST00000478938 CCT6AP40227 531 aaKnown RBP23.81■■□□□ 1.4
SDF4-206ENST00000478938 RPS6KA3P51812 740 aa23.81■■□□□ 1.4
SDF4-206ENST00000478938 MYO1EQ12965 1108 aa23.81■■□□□ 1.4
SDF4-206ENST00000478938 UBE3BQ7Z3V4 1068 aa23.81■■□□□ 1.4
SDF4-206ENST00000478938 LRRC1Q9BTT6 524 aa23.81■■□□□ 1.4
SDF4-206ENST00000478938 RGPD1P0DJD0 1748 aa23.8■■□□□ 1.4
SDF4-206ENST00000478938 FAM107AO95990 144 aa23.8■■□□□ 1.4
SDF4-206ENST00000478938 ANKRD20A8PQ5CZ79 823 aa23.8■■□□□ 1.4
SDF4-206ENST00000478938 CYFIP2Q96F07 1278 aa23.8■■□□□ 1.4
SDF4-206ENST00000478938 ALS2CLQ60I27 953 aa23.8■■□□□ 1.4
SDF4-206ENST00000478938 NUP88Q99567 741 aaPredicted RBP23.8■■□□□ 1.4
SDF4-206ENST00000478938 ANKRD18BA2A2Z9 1011 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 NR1D1P20393 614 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 TTC39AQ5SRH9 613 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 THEMIS2Q5TEJ8 643 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 BZW1Q7L1Q6 419 aaKnown RBP23.79■■□□□ 1.4
SDF4-206ENST00000478938 HOOK2Q96ED9 719 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 BUB1BO60566 1050 aaPredicted RBP23.79■■□□□ 1.4
SDF4-206ENST00000478938 PECAM1P16284 738 aaPredicted RBP23.79■■□□□ 1.4
SDF4-206ENST00000478938 ATP5JP18859 108 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 OR8K1Q8NGG5 319 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 MAP3K14Q99558 947 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 PPANQ9NQ55 473 aaKnown RBP23.79■■□□□ 1.4
SDF4-206ENST00000478938 SERTAD1Q9UHV2 236 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 GGA2Q9UJY4 613 aa23.79■■□□□ 1.4
SDF4-206ENST00000478938 RICTORQ6R327 1708 aa23.78■■□□□ 1.4
SDF4-206ENST00000478938 NDUFA10O95299 355 aa23.78■■□□□ 1.4
SDF4-206ENST00000478938 PPARAQ07869 468 aa23.78■■□□□ 1.4
SDF4-206ENST00000478938 CCDC122Q5T0U0 273 aa23.78■■□□□ 1.4
SDF4-206ENST00000478938 CAPRIN2Q6IMN6 1127 aaKnown RBP23.78■■□□□ 1.4
SDF4-206ENST00000478938 VPS37DQ86XT2 251 aa23.78■■□□□ 1.4
SDF4-206ENST00000478938 EPN1Q9Y6I3 576 aaPredicted RBP23.78■■□□□ 1.4
SDF4-206ENST00000478938 PEAK1Q9H792 1746 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms