RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 USP17L20D6RJB6 530 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 CAPN2P17655 700 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 MAPK4P31152 587 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 SHMT1P34896 483 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 USP17L24Q0WX57 530 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 UBE3CQ15386 1083 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 KIAA1683Q9H0B3 1180 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.73
XRCC6-208ENST00000478914 EMILIN3Q9NT22 766 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 ECHDC1Q9NTX5 307 aa10.52□□□□□ -0.73
XRCC6-208ENST00000478914 TFRCP02786 760 aaKnown RBP10.51□□□□□ -0.73
XRCC6-208ENST00000478914 HMGCRP04035 888 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 ERVK-9P63128 1117 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 ERVK-24P63145 666 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 CCNA1P78396 465 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 GABPAQ06546 454 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 SEPT2Q15019 361 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 TMEM179Q6ZVK1 233 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 U2AF1L4Q8WU68 220 aaKnown RBP10.51□□□□□ -0.73
XRCC6-208ENST00000478914 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 SHISA4Q96DD7 197 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 HTATIP2Q9BUP3 242 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 DCTPP1Q9H773 170 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 ZBTB47Q9UFB7 747 aaPredicted RBP10.51□□□□□ -0.73
XRCC6-208ENST00000478914 SLC4A4Q9Y6R1 1079 aa10.51□□□□□ -0.73
XRCC6-208ENST00000478914 MYH4Q9Y623 1939 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 PARP14Q460N5 1801 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 PRKAB2O43741 272 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 GLRX3O76003 335 aaKnown RBP10.5□□□□□ -0.73
XRCC6-208ENST00000478914 FARP2O94887 1054 aaPredicted RBP10.5□□□□□ -0.73
XRCC6-208ENST00000478914 SGPL1O95470 568 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 CYP2D6P10635 497 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 VCAM1P19320 739 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 LRRFIP1Q32MZ4 808 aaKnown RBP10.5□□□□□ -0.73
XRCC6-208ENST00000478914 SLFNL1Q499Z3 407 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 WDR78Q5VTH9 848 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
XRCC6-208ENST00000478914 ACER1Q8TDN7 264 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 DPF3Q92784 378 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 CCDC17Q96LX7 622 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 RPAP3Q9H6T3 665 aaPredicted RBP10.5□□□□□ -0.73
XRCC6-208ENST00000478914 SH2D4AQ9H788 454 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 TXNRD2Q9NNW7 524 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 RABGAP1Q9Y3P9 1069 aa10.5□□□□□ -0.73
XRCC6-208ENST00000478914 COL11A1P12107 1806 aaPredicted RBP10.49□□□□□ -0.73
XRCC6-208ENST00000478914 ZNFX1Q9P2E3 1918 aaKnown RBP10.49□□□□□ -0.73
XRCC6-208ENST00000478914 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 USP17L21D6R901 530 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 ERC2O15083 957 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 CYP2B6P20813 491 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 RRP1P56182 461 aaKnown RBP10.49□□□□□ -0.73
XRCC6-208ENST00000478914 HABP4Q5JVS0 413 aaKnown RBP10.49□□□□□ -0.73
XRCC6-208ENST00000478914 CATSPERGQ6ZRH7 1159 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 PLEKHH3Q7Z736 793 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 KBTBD3Q8NAB2 608 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 SLC44A5Q8NCS7 719 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 DYNLL2Q96FJ2 89 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 DEFB118Q96PH6 123 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 TANGO6Q9C0B7 1094 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.49□□□□□ -0.73
XRCC6-208ENST00000478914 HMX1Q9NP08 348 aaPredicted RBP10.49□□□□□ -0.73
XRCC6-208ENST00000478914 ARPP21Q9UBL0 812 aaPredicted RBP10.49□□□□□ -0.73
XRCC6-208ENST00000478914 GJD2Q9UKL4 321 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 IVNS1ABPQ9Y6Y0 642 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 FRMPD3Q5JV73 1810 aa10.49□□□□□ -0.73
XRCC6-208ENST00000478914 CENPFP49454 3210 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 A0A0G2JMZ2 1700 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 PEX10O60683 326 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 ZFYP08048 801 aaPredicted RBP10.48□□□□□ -0.73
XRCC6-208ENST00000478914 XRCC5P13010 732 aaKnown RBP10.48□□□□□ -0.73
XRCC6-208ENST00000478914 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
XRCC6-208ENST00000478914 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 RGS2P41220 211 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 CDK8P49336 464 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 EVX2Q03828 476 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 ICA1Q05084 483 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 Q3C1V9 767 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 C12orf60Q5U649 245 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 C16orf86Q6ZW13 317 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 GPR142Q7Z601 462 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 APPBP2Q92624 585 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 PUS7LQ9H0K6 701 aaKnown RBP10.48□□□□□ -0.73
XRCC6-208ENST00000478914 PAK6Q9NQU5 681 aaPredicted RBP10.48□□□□□ -0.73
XRCC6-208ENST00000478914 TTC41PQ6P2S7 1318 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 RPTORQ8N122 1335 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 RLFQ13129 1914 aa10.48□□□□□ -0.73
XRCC6-208ENST00000478914 ALPK3Q96L96 1907 aa10.47□□□□□ -0.73
XRCC6-208ENST00000478914 CYP2D7A0A087X1C5 515 aa10.47□□□□□ -0.73
XRCC6-208ENST00000478914 RNF113AO15541 343 aaKnown RBP10.47□□□□□ -0.73
XRCC6-208ENST00000478914 AKR1B1P15121 316 aa10.47□□□□□ -0.73
XRCC6-208ENST00000478914 ATP2B2Q01814 1243 aa10.47□□□□□ -0.73
XRCC6-208ENST00000478914 COG2Q14746 738 aa10.47□□□□□ -0.73
XRCC6-208ENST00000478914 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
XRCC6-208ENST00000478914 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
XRCC6-208ENST00000478914 LBX2Q6XYB7 198 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms