RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 NFKBIBQ15653 356 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 PAOXQ6QHF9 649 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 CLEC10AQ8IUN9 316 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 SLITRK4Q8IW52 837 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 KCT2Q8NC54 265 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 ZNF507Q8TCN5 953 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 SPATA32Q96LK8 384 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 PCOLCE2Q9UKZ9 415 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 POLR3KQ9Y2Y1 108 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-207ENST00000478913 RAPGEF6Q8TEU7 1601 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 PGRP06401 933 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 ZNF165P49910 485 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC171-207ENST00000478913 RASGRP4Q8TDF6 673 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 FAM83CQ9BQN1 747 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 LGR6Q9HBX8 967 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 STOML1Q9UBI4 398 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 CORINQ9Y5Q5 1042 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 PRDM2Q13029 1718 aa7.94□□□□□ -1.14
CCDC171-207ENST00000478913 CPS1P31327 1500 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 H2AFB2P0C5Z0 115 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 PLCG1P19174 1290 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 TINF2Q9BSI4 451 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 C7orf69Q9H7B7 122 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 PCDHB14Q9Y5E9 798 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 CDK12Q9NYV4 1490 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-207ENST00000478913 SHANK2Q9UPX8 1470 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 ADAMTS12P58397 1594 aa7.93□□□□□ -1.14
CCDC171-207ENST00000478913 FER1L4A9Z1Z3 1794 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 HMX2A2RU54 273 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 HTR3BO95264 441 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 RANGAP1P46060 587 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-207ENST00000478913 COL9A2Q14055 689 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-207ENST00000478913 GK5Q6ZS86 529 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 UBE3DQ7Z6J8 389 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 HID1Q8IV36 788 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 REXO1Q8N1G1 1221 aaKnown RBP7.92□□□□□ -1.14
CCDC171-207ENST00000478913 ADAM30Q9UKF2 790 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 EFR3BQ9Y2G0 817 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 RGS12O14924 1447 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 WDR7Q9Y4E6 1490 aa7.92□□□□□ -1.14
CCDC171-207ENST00000478913 DYNC1LI2O43237 492 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-207ENST00000478913 RSPO4Q2I0M5 234 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-207ENST00000478913 NAALADL2Q58DX5 795 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 DEFB132Q7Z7B7 95 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 VPS37DQ86XT2 251 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 KRTAP4-7Q9BYR0 210 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 FBRSQ9HAH7 460 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 GINM1Q9NU53 330 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 REV1Q9UBZ9 1251 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 PRR36Q9H6K5 1346 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 AKNAQ7Z591 1439 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 UACAQ9BZF9 1416 aa7.91□□□□□ -1.14
CCDC171-207ENST00000478913 CLCQ05315 142 aa7.9□□□□□ -1.14
CCDC171-207ENST00000478913 NKAPLQ5M9Q1 402 aa7.9□□□□□ -1.14
CCDC171-207ENST00000478913 ACSF2Q96CM8 615 aaPredicted RBP7.9□□□□□ -1.14
CCDC171-207ENST00000478913 C8orf37Q96NL8 207 aa7.9□□□□□ -1.14
CCDC171-207ENST00000478913 FERD3LQ96RJ6 166 aa7.9□□□□□ -1.14
CCDC171-207ENST00000478913 TJP2Q9UDY2 1190 aa7.9□□□□□ -1.14
CCDC171-207ENST00000478913 PRKAG2Q9UGJ0 569 aa7.9□□□□□ -1.14
CCDC171-207ENST00000478913 TRAPPC8Q9Y2L5 1435 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 TNIKQ9UKE5 1360 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 SCO2A0A1W2PP80 73 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 DYRK3O43781 588 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 ATE1O95260 518 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 CDK5R2Q13319 367 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 NKG7Q16617 165 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 TMEM201Q5SNT2 666 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 SEC16BQ96JE7 1060 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 TMEM87BQ96K49 555 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 TBC1D32Q96NH3 1257 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 EHMT1Q9H9B1 1298 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 KLHL3Q9UH77 587 aa7.89□□□□□ -1.15
CCDC171-207ENST00000478913 UHRF1BP1LA0JNW5 1464 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 GSC2O15499 205 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 LRIG2O94898 1065 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-207ENST00000478913 DNAJA1P31689 397 aaKnown RBP7.88□□□□□ -1.15
CCDC171-207ENST00000478913 SOX9P48436 509 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 NASPP49321 788 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-207ENST00000478913 SLBPQ14493 270 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC171-207ENST00000478913 FBXW10Q5XX13 1052 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 RNF43Q68DV7 783 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 SLC6A19Q695T7 634 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 SEZ6L2Q6UXD5 910 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 ARMCX6Q7L4S7 300 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 MCATQ8IVS2 390 aaKnown RBP7.88□□□□□ -1.15
CCDC171-207ENST00000478913 MRPL41Q8IXM3 137 aaKnown RBP7.88□□□□□ -1.15
CCDC171-207ENST00000478913 SLC43A3Q8NBI5 491 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 FAM13CQ8NE31 585 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 FOXQ1Q9C009 403 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 C1GALT1Q9NS00 363 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 PPT2Q9UMR5 302 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 SETD1BQ9UPS6 1966 aaKnown RBP7.88□□□□□ -1.15
CCDC171-207ENST00000478913 KDM5BQ9UGL1 1544 aa7.88□□□□□ -1.15
CCDC171-207ENST00000478913 PHLDB1Q86UU1 1377 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 IMPDH2P12268 514 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 FSTP19883 344 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 CAP2P40123 477 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms