RNA–Protein interactions for RNA: ENST00000478843.5

PRKCD-205, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-205ENST00000478843 TRPV1Q8NER1 839 aa11.71□□□□□ -0.53
PRKCD-205ENST00000478843 FAM161BQ96MY7 647 aa11.71□□□□□ -0.53
PRKCD-205ENST00000478843 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.53
PRKCD-205ENST00000478843 SENP6Q9GZR1 1112 aaPredicted RBP11.71□□□□□ -0.53
PRKCD-205ENST00000478843 SAP30BPQ9UHR5 308 aaKnown RBP11.71□□□□□ -0.53
PRKCD-205ENST00000478843 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.54
PRKCD-205ENST00000478843 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 SLC15A5A6NIM6 579 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 CYP2E1P05181 493 aaPredicted RBP11.7□□□□□ -0.54
PRKCD-205ENST00000478843 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 CYBAP13498 195 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 VCAM1P19320 739 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 PTPREP23469 700 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 RARSP54136 660 aaKnown RBP11.7□□□□□ -0.54
PRKCD-205ENST00000478843 RTP1P59025 263 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
PRKCD-205ENST00000478843 CCNA1P78396 465 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
PRKCD-205ENST00000478843 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 MFSD14CQ5VZR4 134 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 LBX2Q6XYB7 198 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 NPLOC4Q8TAT6 608 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 ARHGAP45Q92619 1136 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 LPAR1Q92633 364 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 EDC3Q96F86 508 aaKnown RBP11.7□□□□□ -0.54
PRKCD-205ENST00000478843 LBHD1Q9BQE6 289 aaPredicted RBP11.7□□□□□ -0.54
PRKCD-205ENST00000478843 DBNDD2Q9BQY9 259 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
PRKCD-205ENST00000478843 BTBD7Q9P203 1132 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
PRKCD-205ENST00000478843 ZNFX1Q9P2E3 1918 aaKnown RBP11.69□□□□□ -0.54
PRKCD-205ENST00000478843 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L15C9J2P7 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L13C9JLJ4 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L11C9JVI0 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L18D6R9N7 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L22D6RA61 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L17D6RBQ6 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L19D6RCP7 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L20D6RJB6 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 MSCO60682 206 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 GLRX3O76003 335 aaKnown RBP11.69□□□□□ -0.54
PRKCD-205ENST00000478843 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
PRKCD-205ENST00000478843 USP17L24Q0WX57 530 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 TTC39AQ5SRH9 613 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 TATDN1Q6P1N9 297 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 CATSPERGQ6ZRH7 1159 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 FEZ1Q99689 392 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 KIAA1683Q9H0B3 1180 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 EHD4Q9H223 541 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 CWC22Q9HCG8 908 aaKnown RBP11.69□□□□□ -0.54
PRKCD-205ENST00000478843 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
PRKCD-205ENST00000478843 IGSF3O75054 1194 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 GNAI2P04899 355 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 CYP2C19P33261 490 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRKCD-205ENST00000478843 SNX17Q15036 470 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 C9orf50Q5SZB4 431 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 WDR78Q5VTH9 848 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 ATF7IPQ6VMQ6 1270 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 ZNF512BQ96KM6 892 aaPredicted RBP11.68□□□□□ -0.54
PRKCD-205ENST00000478843 CDX2Q99626 313 aaPredicted RBP11.68□□□□□ -0.54
PRKCD-205ENST00000478843 TNNQ9UQP3 1299 aa11.68□□□□□ -0.54
PRKCD-205ENST00000478843 TRIM27P14373 513 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 CNGA1P29973 690 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 ZAP70P43403 619 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 USP14P54578 494 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 ATP2B2Q01814 1243 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 POLA2Q14181 598 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 SHHQ15465 462 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 MAFAQ8NHW3 353 aaPredicted RBP11.67□□□□□ -0.54
PRKCD-205ENST00000478843 TTYH1Q9H313 450 aaPredicted RBP11.67□□□□□ -0.54
PRKCD-205ENST00000478843 PDLIM7Q9NR12 457 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
PRKCD-205ENST00000478843 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 ATP11BQ9Y2G3 1177 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 IVNS1ABPQ9Y6Y0 642 aa11.67□□□□□ -0.54
PRKCD-205ENST00000478843 BDP1A6H8Y1 2624 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 SMCHD1A6NHR9 2005 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 CYP7A1P22680 504 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 GUCY1A2P33402 732 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 SHMT1P34896 483 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 RAB3GAP1Q15042 981 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 TRIM60Q495X7 471 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 CCDC158Q5M9N0 1113 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 GJC2Q5T442 439 aaPredicted RBP11.66□□□□□ -0.54
PRKCD-205ENST00000478843 OLFML2BQ68BL8 750 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 MIGA1Q8NAN2 632 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
PRKCD-205ENST00000478843 PRKAG2Q9UGJ0 569 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 DBNLQ9UJU6 430 aaKnown RBP11.66□□□□□ -0.54
PRKCD-205ENST00000478843 CHD7Q9P2D1 2997 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 REV3LO60673 3130 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
PRKCD-205ENST00000478843 BAZ2AQ9UIF9 1905 aaKnown RBP11.65□□□□□ -0.54
PRKCD-205ENST00000478843 ADORA2AP29274 412 aa11.65□□□□□ -0.54
PRKCD-205ENST00000478843 SMAD3P84022 425 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms