RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ALDH1A1P00352 501 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 HSPA1AP0DMV8 641 aaKnown RBP13.46□□□□□ -0.25
SRRT-211ENST00000478693 HSPA1BP0DMV9 641 aaKnown RBP13.46□□□□□ -0.25
SRRT-211ENST00000478693 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
SRRT-211ENST00000478693 GUCY1A2P33402 732 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 TRDNQ13061 729 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 PRRT2Q7Z6L0 340 aaPredicted RBP13.46□□□□□ -0.25
SRRT-211ENST00000478693 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 ESR2Q92731 530 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 MAP4K1Q92918 833 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 WDR18Q9BV38 432 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 INCENPQ9NQS7 918 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 MYH8P13535 1937 aa13.46□□□□□ -0.25
SRRT-211ENST00000478693 LAMA4Q16363 1823 aa13.46□□□□□ -0.26
SRRT-211ENST00000478693 C19orf81C9J6K1 198 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 IGF2BP3O00425 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
SRRT-211ENST00000478693 ORC4O43929 436 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 TM4SF4P48230 202 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 USP14P54578 494 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 BACE1P56817 501 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 RALYLQ86SE5 291 aaKnown RBP13.45□□□□□ -0.26
SRRT-211ENST00000478693 KRT23Q9C075 422 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 CNNM2Q9H8M5 875 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
SRRT-211ENST00000478693 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
SRRT-211ENST00000478693 B4E1Z4 1266 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 BTBD19C9JJ37 291 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 CA12O43570 354 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 TRPA1O75762 1119 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 CYP21A2P08686 494 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
SRRT-211ENST00000478693 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■□□□□ 9.7
SRRT-211ENST00000478693 DGKZQ13574 1117 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 TAF1CQ15572 869 aaPredicted RBP13.44□□□□□ -0.26
SRRT-211ENST00000478693 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 FAM43AQ8N2R8 423 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
SRRT-211ENST00000478693 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 CEP95Q96GE4 821 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 WBP1LQ9NX94 342 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 CLIP2Q9UDT6 1046 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 ISY1Q9ULR0 285 aaKnown RBP13.44□□□□□ -0.26
SRRT-211ENST00000478693 STX8Q9UNK0 236 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 AGTPBP1Q9UPW5 1226 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
SRRT-211ENST00000478693 PDHXO00330 501 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 SLC27A2O14975 620 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 KDM4AO75164 1064 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 TTLL1O95922 423 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 SH3D19Q5HYK7 790 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 CREB3L3Q68CJ9 461 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 PTPN18Q99952 460 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 KIAA1683Q9H0B3 1180 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 GOPCQ9HD26 462 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 SAGE1Q9NXZ1 904 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
SRRT-211ENST00000478693 PHIPQ8WWQ0 1821 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 A0A1W2PRG0 241 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 EIF5BO60841 1220 aaKnown RBP13.42□□□□□ -0.26
SRRT-211ENST00000478693 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
SRRT-211ENST00000478693 OSBPP22059 807 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 MCCP23508 829 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 NT5C2P49902 561 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
SRRT-211ENST00000478693 TREML2Q5T2D2 321 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 LRRC47Q8N1G4 583 aaKnown RBP13.42□□□□□ -0.26
SRRT-211ENST00000478693 NCOA7Q8NI08 942 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
SRRT-211ENST00000478693 PARK7Q99497 189 aaKnown RBP13.42□□□□□ -0.26
SRRT-211ENST00000478693 UBAC1Q9BSL1 405 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
SRRT-211ENST00000478693 ZFYVE28Q9HCC9 887 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 MTMR4Q9NYA4 1195 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 NYAP2Q9P242 653 aa13.42□□□□□ -0.26
SRRT-211ENST00000478693 IGKV6D-41A0A0C4DH26 115 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 E7EWF7 191 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 NMT2O60551 498 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 TBC1D8O95759 1140 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 FGRP09769 529 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 VCAM1P19320 739 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
SRRT-211ENST00000478693 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 TANGO6Q9C0B7 1094 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 VCPKMTQ9H867 229 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
SRRT-211ENST00000478693 MTMR7Q9Y216 660 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 TMX2Q9Y320 296 aa13.41□□□□□ -0.26
SRRT-211ENST00000478693 LOC285556D6RIA3 1793 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 ERICH2A1L162 156 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms