RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ETV2O00321 342 aaPredicted RBP6.52□□□□□ -1.37
HPS3-205ENST00000478525 PGRP06401 933 aa6.52□□□□□ -1.37
HPS3-205ENST00000478525 RPS26P62854 115 aaKnown RBP6.52□□□□□ -1.37
HPS3-205ENST00000478525 CREG2Q8IUH2 290 aa6.52□□□□□ -1.37
HPS3-205ENST00000478525 DNAJB8Q8NHS0 232 aa6.52□□□□□ -1.37
HPS3-205ENST00000478525 ADAMTS10Q9H324 1103 aa6.52□□□□□ -1.37
HPS3-205ENST00000478525 NCANO14594 1321 aa6.51□□□□□ -1.37
HPS3-205ENST00000478525 TCAF2A6NFQ2 919 aa6.51□□□□□ -1.37
HPS3-205ENST00000478525 GLDCP23378 1020 aa6.51□□□□□ -1.37
HPS3-205ENST00000478525 TRHRP34981 398 aaPredicted RBP6.51□□□□□ -1.37
HPS3-205ENST00000478525 CCDC85BQ15834 202 aaPredicted RBP6.51□□□□□ -1.37
HPS3-205ENST00000478525 AMIGO3Q86WK7 504 aa6.51□□□□□ -1.37
HPS3-205ENST00000478525 TMEM87BQ96K49 555 aa6.51□□□□□ -1.37
HPS3-205ENST00000478525 RNF32Q9H0A6 362 aa6.51□□□□□ -1.37
HPS3-205ENST00000478525 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
HPS3-205ENST00000478525 LDHBP07195 334 aaKnown RBP6.5□□□□□ -1.37
HPS3-205ENST00000478525 ETV3P41162 512 aa6.5□□□□□ -1.37
HPS3-205ENST00000478525 GAB4Q2WGN9 574 aa6.5□□□□□ -1.37
HPS3-205ENST00000478525 CIAPIN1Q6FI81 312 aa6.5□□□□□ -1.37
HPS3-205ENST00000478525 DUSP15Q9H1R2 295 aaPredicted RBP6.5□□□□□ -1.37
HPS3-205ENST00000478525 SP110Q9HB58 689 aa6.5□□□□□ -1.37
HPS3-205ENST00000478525 RAPGEFL1Q9UHV5 662 aa6.5□□□□□ -1.37
HPS3-205ENST00000478525 SMG5Q9UPR3 1016 aaKnown RBP6.5□□□□□ -1.37
HPS3-205ENST00000478525 PRRG2O14669 202 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 INHBBP09529 407 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 LMNB1P20700 586 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
HPS3-205ENST00000478525 TPP2P29144 1249 aaPredicted RBP6.49□□□□□ -1.37
HPS3-205ENST00000478525 GNA15P30679 374 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 LIG3P49916 1009 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 LINC00310P59036 64 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 MAP3K11Q16584 847 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 SLC6A19Q695T7 634 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 AGMOQ6ZNB7 445 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 FRMD6Q96NE9 622 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 SLC26A8Q96RN1 970 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 IVNS1ABPQ9Y6Y0 642 aa6.49□□□□□ -1.37
HPS3-205ENST00000478525 B8ZZF3 427 aa6.48□□□□□ -1.37
HPS3-205ENST00000478525 SUPT5HO00267 1087 aaKnown RBP6.48□□□□□ -1.37
HPS3-205ENST00000478525 ACSF2Q96CM8 615 aaPredicted RBP6.48□□□□□ -1.37
HPS3-205ENST00000478525 DUSP13Q9UII6 198 aa6.48□□□□□ -1.37
HPS3-205ENST00000478525 NUAK1O60285 661 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 ZGLP1P0C6A0 271 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 SRFP11831 508 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
HPS3-205ENST00000478525 EGR3Q06889 387 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 TIGD5Q53EQ6 642 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 MCATQ8IVS2 390 aaKnown RBP6.47□□□□□ -1.37
HPS3-205ENST00000478525 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 TRIT1Q9H3H1 467 aaKnown RBP6.47□□□□□ -1.37
HPS3-205ENST00000478525 C19orf44Q9H6X5 657 aa6.47□□□□□ -1.37
HPS3-205ENST00000478525 BUD31P41223 144 aaPredicted RBP6.46□□□□□ -1.38
HPS3-205ENST00000478525 PDE4BQ07343 736 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 TSPYL5Q86VY4 417 aaPredicted RBP6.46□□□□□ -1.38
HPS3-205ENST00000478525 DTWD2Q8NBA8 298 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 PDZD8Q8NEN9 1154 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 KCNN1Q92952 543 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 GPR62Q9BZJ7 368 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 RNF19AQ9NV58 838 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 GPATCH2Q9NW75 528 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 ADAM30Q9UKF2 790 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 CEP131Q9UPN4 1083 aa6.46□□□□□ -1.38
HPS3-205ENST00000478525 RPL6Q02878 288 aaKnown RBP6.45□□□□□ -1.38
HPS3-205ENST00000478525 CYB5D2Q8WUJ1 264 aa6.45□□□□□ -1.38
HPS3-205ENST00000478525 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
HPS3-205ENST00000478525 MCOLN1Q9GZU1 580 aa6.45□□□□□ -1.38
HPS3-205ENST00000478525 PCDHA11Q9Y5I1 949 aa6.45□□□□□ -1.38
HPS3-205ENST00000478525 CORINQ9Y5Q5 1042 aa6.45□□□□□ -1.38
HPS3-205ENST00000478525 PRPF40AO75400 957 aaKnown RBP6.44□□□□□ -1.38
HPS3-205ENST00000478525 LTKP29376 864 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 TSNAXIP1Q2TAA8 658 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 MEI1Q5TIA1 1274 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 IRF2BP1Q8IU81 584 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 LILRA2Q8N149 483 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 IRF2BPLQ9H1B7 796 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 SLC6A17Q9H1V8 727 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 AK5Q9Y6K8 562 aa6.44□□□□□ -1.38
HPS3-205ENST00000478525 MYOCOSA0A1B0GUC4 107 aa6.43□□□□□ -1.38
HPS3-205ENST00000478525 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
HPS3-205ENST00000478525 TLR6Q9Y2C9 796 aa6.43□□□□□ -1.38
HPS3-205ENST00000478525 FITM1A5D6W6 292 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 UPK3BL1B0FP48 263 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 UPK3BL2E5RIL1 263 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 LRRN2O75325 713 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 HOXA5P20719 270 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 CTSWP56202 376 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 DLG4P78352 724 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 NR0B2Q15466 257 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 ZNF605Q86T29 641 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 OXR1Q8N573 874 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 JARID2Q92833 1246 aaPredicted RBP6.42□□□□□ -1.38
HPS3-205ENST00000478525 INTS4Q96HW7 963 aaKnown RBP6.42□□□□□ -1.38
HPS3-205ENST00000478525 C20orf173Q96LM9 149 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 DUSP9Q99956 384 aaKnown RBP6.42□□□□□ -1.38
HPS3-205ENST00000478525 KCNH3Q9ULD8 1083 aa6.42□□□□□ -1.38
HPS3-205ENST00000478525 PLCG1P19174 1290 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms