RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PRDM5Q9NQX1 630 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 PLAGL2Q9UPG8 496 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 CUL7Q14999 1698 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 KIF21AQ7Z4S6 1674 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 CC2D2AQ9P2K1 1620 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 TIAM1Q13009 1591 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 RRBP1Q9P2E9 1410 aaKnown RBP6.1□□□□□ -1.43
GPNMB-210ENST00000478451 UNCXA6NJT0 531 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 PRRG2O14669 202 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 CILPO75339 1184 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 BPNT1O95861 308 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 CST3P01034 146 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-210ENST00000478451 ZNF16P17020 682 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-210ENST00000478451 PRKCQQ04759 706 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 PDE4BQ07343 736 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 BNIP3Q12983 259 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 HRASLS5Q96KN8 279 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 TJP2Q9UDY2 1190 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 VAV3Q9UKW4 847 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 MAPK8IP1Q9UQF2 711 aa6.1□□□□□ -1.43
GPNMB-210ENST00000478451 TMEM265A0A087WTH1 108 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 RBM47A0AV96 593 aaKnown RBP6.09□□□□□ -1.43
GPNMB-210ENST00000478451 FAM221AA4D161 298 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 GNAT3A8MTJ3 354 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 F13A1P00488 732 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 FAM160A1Q05DH4 1040 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 SNAP47Q5SQN1 464 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 ERMP1Q7Z2K6 904 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 SPRED2Q7Z698 418 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 MRPL41Q8IXM3 137 aaKnown RBP6.09□□□□□ -1.43
GPNMB-210ENST00000478451 XAGE3Q8WTP9 111 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 GATAD2BQ8WXI9 593 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 TMEM87BQ96K49 555 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 DPH2Q9BQC3 489 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-210ENST00000478451 TNKS2Q9H2K2 1166 aa6.09□□□□□ -1.43
GPNMB-210ENST00000478451 TPX2Q9ULW0 747 aaKnown RBP6.09□□□□□ -1.43
GPNMB-210ENST00000478451 AOC3Q16853 763 aa6.08□□□□□ -1.44
GPNMB-210ENST00000478451 LETMD1Q6P1Q0 360 aa6.08□□□□□ -1.44
GPNMB-210ENST00000478451 SPACA3Q8IXA5 215 aa6.08□□□□□ -1.44
GPNMB-210ENST00000478451 KBTBD4Q9NVX7 518 aa6.08□□□□□ -1.44
GPNMB-210ENST00000478451 ADAM30Q9UKF2 790 aa6.08□□□□□ -1.44
GPNMB-210ENST00000478451 CORINQ9Y5Q5 1042 aa6.08□□□□□ -1.44
GPNMB-210ENST00000478451 EFCAB5A4FU69 1503 aa6.08□□□□□ -1.44
GPNMB-210ENST00000478451 MINDY4BA8MYZ0 360 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 CD8BP10966 210 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 CD96P40200 585 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 PLCL1Q15111 1095 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 NKPD1Q17RQ9 610 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 SFRP5Q5T4F7 317 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 SLC6A19Q695T7 634 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 ZNF746Q6NUN9 644 aaPredicted RBP6.07□□□□□ -1.44
GPNMB-210ENST00000478451 GOLM1Q8NBJ4 401 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 ACSF2Q96CM8 615 aaPredicted RBP6.07□□□□□ -1.44
GPNMB-210ENST00000478451 COPRSQ9NQ92 184 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 SNX11Q9Y5W9 270 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 FHAD1B1AJZ9 1412 aa6.07□□□□□ -1.44
GPNMB-210ENST00000478451 DHX57Q6P158 1386 aaKnown RBP6.06□□□□□ -1.44
GPNMB-210ENST00000478451 PRR33A8MZF0 331 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 PLCG1P19174 1290 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 GARTP22102 1010 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 CLCN7P51798 805 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 ZNF648Q5T619 568 aaPredicted RBP6.06□□□□□ -1.44
GPNMB-210ENST00000478451 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 HS2ST1Q7LGA3 356 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 MCATQ8IVS2 390 aaKnown RBP6.06□□□□□ -1.44
GPNMB-210ENST00000478451 MFSD4AQ8N468 514 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 RIN3Q8TB24 985 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 ARHGAP35Q9NRY4 1499 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 CCNB3Q8WWL7 1395 aa6.06□□□□□ -1.44
GPNMB-210ENST00000478451 CNTNAP4Q9C0A0 1308 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-210ENST00000478451 FUT4P22083 530 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 MPP2Q14168 576 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 ANGEL2Q5VTE6 544 aaKnown RBP6.05□□□□□ -1.44
GPNMB-210ENST00000478451 FAM196AQ6ZSG2 479 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 FAM13CQ8NE31 585 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 ASB11Q8WXH4 323 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 KIAA1522Q9P206 1035 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-210ENST00000478451 GGT7Q9UJ14 662 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 POLR3KQ9Y2Y1 108 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-210ENST00000478451 DNMBPQ6XZF7 1577 aa6.05□□□□□ -1.44
GPNMB-210ENST00000478451 PITPNM2Q9BZ72 1349 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 WDR97A6NE52 1622 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 FAM155AB1AL88 458 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-210ENST00000478451 GRIN3BO60391 1043 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 CYP7A1P22680 504 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 ZNF124Q15973 351 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 ZNF792Q3KQV3 632 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 TMEM201Q5SNT2 666 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 FBXL19Q6PCT2 694 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 LILRA6Q6PI73 481 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 REC114Q7Z4M0 266 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 CDH24Q86UP0 819 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 FBXO27Q8NI29 283 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 COX4I2Q96KJ9 171 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 KCNQ5Q9NR82 932 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 SUPT16HQ9Y5B9 1047 aaKnown RBP6.04□□□□□ -1.44
GPNMB-210ENST00000478451 CAPN6Q9Y6Q1 641 aa6.04□□□□□ -1.44
GPNMB-210ENST00000478451 FYCO1Q9BQS8 1478 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 PRR36Q9H6K5 1346 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms