RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 CHGBP05060 677 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 CYP2D6P10635 497 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
SNX21-210ENST00000478230 USP17L24Q0WX57 530 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 SEPT2Q15019 361 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 DYNLL2Q96FJ2 89 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 SRRDQ9UH36 339 aa18.02■□□□□ 0.48
SNX21-210ENST00000478230 MINDY4BA8MYZ0 360 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 RGS19P49795 217 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 ANKRD13CQ8N6S4 541 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 RAET1EQ8TD07 263 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 RILPL2Q969X0 211 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 COA7Q96BR5 231 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 NAPBQ9H115 298 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 KANSL2Q9H9L4 492 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 EMILIN3Q9NT22 766 aa18.01■□□□□ 0.47
SNX21-210ENST00000478230 M0R2C6 588 aa18■□□□□ 0.47
SNX21-210ENST00000478230 HIP1O00291 1037 aa18■□□□□ 0.47
SNX21-210ENST00000478230 PDE4BQ07343 736 aa18■□□□□ 0.47
SNX21-210ENST00000478230 PLEKHM2Q8IWE5 1019 aa18■□□□□ 0.47
SNX21-210ENST00000478230 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
SNX21-210ENST00000478230 IFNL3Q8IZI9 196 aa18■□□□□ 0.47
SNX21-210ENST00000478230 ZNF444Q8N0Y2 327 aaPredicted RBP18■□□□□ 0.47
SNX21-210ENST00000478230 LPAR1Q92633 364 aa18■□□□□ 0.47
SNX21-210ENST00000478230 TRIM47Q96LD4 638 aa18■□□□□ 0.47
SNX21-210ENST00000478230 PTPRFP10586 1907 aa18■□□□□ 0.47
SNX21-210ENST00000478230 DDX60LQ5H9U9 1706 aaKnown RBP17.99■□□□□ 0.47
SNX21-210ENST00000478230 TNPO2O14787 897 aaKnown RBP17.99■□□□□ 0.47
SNX21-210ENST00000478230 ICA1Q05084 483 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 ZYXQ15942 572 aaKnown RBP17.99■□□□□ 0.47
SNX21-210ENST00000478230 MCMDC2Q4G0Z9 681 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 PPP4R3BQ5MIZ7 849 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 SLC44A5Q8NCS7 719 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 ARMC5Q96C12 935 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 TMEM106CQ9BVX2 250 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 HOXC10Q9NYD6 342 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 MORF4L1Q9UBU8 362 aa17.99■□□□□ 0.47
SNX21-210ENST00000478230 CYP2D7A0A087X1C5 515 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 GUCY1A2P33402 732 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 HERVK_113P62684 666 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 CCNA1P78396 465 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 SHROOM1Q2M3G4 852 aaPredicted RBP17.98■□□□□ 0.47
SNX21-210ENST00000478230 CATSPERGQ6ZRH7 1159 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 GPRC5AQ8NFJ5 357 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 P2RX7Q99572 595 aaKnown RBP17.98■□□□□ 0.47
SNX21-210ENST00000478230 ARHGAP39Q9C0H5 1083 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 PTCH2Q9Y6C5 1203 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 MYPNQ86TC9 1320 aa17.98■□□□□ 0.47
SNX21-210ENST00000478230 LOC285556D6RIA3 1793 aa17.97■□□□□ 0.47
SNX21-210ENST00000478230 ROBO3Q96MS0 1386 aa17.97■□□□□ 0.47
SNX21-210ENST00000478230 AKR1B1P15121 316 aa17.97■□□□□ 0.47
SNX21-210ENST00000478230 MLLT1Q03111 559 aaPredicted RBP17.97■□□□□ 0.47
SNX21-210ENST00000478230 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
SNX21-210ENST00000478230 SEC62Q99442 399 aaKnown RBP17.97■□□□□ 0.47
SNX21-210ENST00000478230 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
SNX21-210ENST00000478230 TMX2Q9Y320 296 aa17.97■□□□□ 0.47
SNX21-210ENST00000478230 RABGAP1Q9Y3P9 1069 aa17.97■□□□□ 0.47
SNX21-210ENST00000478230 VCAM1P19320 739 aa17.96■□□□□ 0.47
SNX21-210ENST00000478230 UBXN2AP68543 259 aa17.96■□□□□ 0.47
SNX21-210ENST00000478230 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
SNX21-210ENST00000478230 ALX1Q15699 326 aa17.96■□□□□ 0.47
SNX21-210ENST00000478230 MAPK4P31152 587 aa17.95■□□□□ 0.46
SNX21-210ENST00000478230 GRK4P32298 578 aa17.95■□□□□ 0.46
SNX21-210ENST00000478230 EVX2Q03828 476 aa17.95■□□□□ 0.46
SNX21-210ENST00000478230 IRF5Q13568 498 aa17.95■□□□□ 0.46
SNX21-210ENST00000478230 COG2Q14746 738 aa17.95■□□□□ 0.46
SNX21-210ENST00000478230 SLAIN1Q8ND83 568 aa17.95■□□□□ 0.46
SNX21-210ENST00000478230 RPAP3Q9H6T3 665 aaPredicted RBP17.95■□□□□ 0.46
SNX21-210ENST00000478230 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
SNX21-210ENST00000478230 EPB41L4AQ9HCS5 686 aaPredicted RBP17.95■□□□□ 0.46
SNX21-210ENST00000478230 DIAPH3Q9NSV4 1193 aa17.95■□□□□ 0.46
SNX21-210ENST00000478230 BIN2Q9UBW5 565 aaPredicted RBP17.95■□□□□ 0.46
SNX21-210ENST00000478230 BAZ2AQ9UIF9 1905 aaKnown RBP17.95■□□□□ 0.46
SNX21-210ENST00000478230 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
SNX21-210ENST00000478230 CAPN2P17655 700 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 SDSP20132 328 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 RASA1P20936 1047 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 SOX10P56693 466 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 CAP1Q01518 475 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 ATP2B2Q01814 1243 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 PPARAQ07869 468 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 LBX2Q6XYB7 198 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 MB21D1Q8N884 522 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 PXYLP1Q8TE99 480 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 VCPKMTQ9H867 229 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 SYNPO2Q9UMS6 1093 aa17.94■□□□□ 0.46
SNX21-210ENST00000478230 A0A1W2PRG0 241 aa17.93■□□□□ 0.46
SNX21-210ENST00000478230 WDR46O15213 610 aaKnown RBP17.93■□□□□ 0.46
SNX21-210ENST00000478230 EEF2P13639 858 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms