RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 USP17L11C9JVI0 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L18D6R9N7 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L22D6RA61 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L17D6RBQ6 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L19D6RCP7 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L20D6RJB6 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 GH2P01242 217 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 IGHA2P01877 340 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 GNAI3P08754 354 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 CNGA1P29973 690 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 USP17L24Q0WX57 530 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 SHHQ15465 462 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 WDR78Q5VTH9 848 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 LBX2Q6XYB7 198 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 SEMA6BQ9H3T3 888 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 ATP11BQ9Y2G3 1177 aa24.87■■□□□ 1.57
PDLIM1-202ENST00000477757 HLA-DOAP06340 250 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 CYBAP13498 195 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 ATP2B2Q01814 1243 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 C9orf50Q5SZB4 431 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 ATF7IPQ6VMQ6 1270 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 TRPV1Q8NER1 839 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 FEZ1Q99689 392 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 PRDM6Q9NQX0 595 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 SAP30BPQ9UHR5 308 aaKnown RBP24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 IVNS1ABPQ9Y6Y0 642 aa24.86■■□□□ 1.57
PDLIM1-202ENST00000477757 CT47B1P0C2W7 299 aaPredicted RBP24.85■■□□□ 1.57
PDLIM1-202ENST00000477757 CYP2C19P33261 490 aa24.85■■□□□ 1.57
PDLIM1-202ENST00000477757 ZYXQ15942 572 aaKnown RBP24.85■■□□□ 1.57
PDLIM1-202ENST00000477757 VCAM1P19320 739 aa24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 USP14P54578 494 aa24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 SMAD3P84022 425 aaKnown RBP24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 CATSPERGQ6ZRH7 1159 aa24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 NPLOC4Q8TAT6 608 aa24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 KIAA1683Q9H0B3 1180 aa24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 TTYH1Q9H313 450 aaPredicted RBP24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 SNRKQ9NRH2 765 aa24.84■■□□□ 1.57
PDLIM1-202ENST00000477757 MUC3AQ02505 3323 aa24.83■■□□□ 1.57
PDLIM1-202ENST00000477757 IGSF3O75054 1194 aa24.83■■□□□ 1.57
PDLIM1-202ENST00000477757 SNX17Q15036 470 aa24.83■■□□□ 1.57
PDLIM1-202ENST00000477757 TATDN1Q6P1N9 297 aa24.83■■□□□ 1.57
PDLIM1-202ENST00000477757 MYLIPQ8WY64 445 aa24.83■■□□□ 1.57
PDLIM1-202ENST00000477757 BTBD7Q9P203 1132 aa24.83■■□□□ 1.57
PDLIM1-202ENST00000477757 KBTBD13C9JR72 458 aa24.82■■□□□ 1.56
PDLIM1-202ENST00000477757 GJC2Q5T442 439 aaPredicted RBP24.82■■□□□ 1.56
PDLIM1-202ENST00000477757 SLC39A5Q6ZMH5 540 aa24.82■■□□□ 1.56
PDLIM1-202ENST00000477757 ARRDC4Q8NCT1 418 aa24.82■■□□□ 1.56
PDLIM1-202ENST00000477757 CDCA7LQ96GN5 454 aa24.82■■□□□ 1.56
PDLIM1-202ENST00000477757 PRDM5Q9NQX1 630 aaPredicted RBP24.82■■□□□ 1.56
PDLIM1-202ENST00000477757 SPDYE16A6NNV3 312 aaPredicted RBP24.81■■□□□ 1.56
PDLIM1-202ENST00000477757 OLFML2BQ68BL8 750 aa24.81■■□□□ 1.56
PDLIM1-202ENST00000477757 TRMT2AQ8IZ69 625 aaKnown RBP24.81■■□□□ 1.56
PDLIM1-202ENST00000477757 PDLIM7Q9NR12 457 aa24.81■■□□□ 1.56
PDLIM1-202ENST00000477757 CYP2E1P05181 493 aaPredicted RBP24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 FOSL2P15408 326 aa24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 G3BP1Q13283 466 aaKnown RBP eCLIP24.8■■□□□ 1.562e-6■■■□□ 18.9
PDLIM1-202ENST00000477757 TRIM60Q495X7 471 aa24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 TTC39AQ5SRH9 613 aa24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 BADQ92934 168 aa24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 EHD4Q9H223 541 aa24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 MYH1P12882 1939 aa24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 A0A0G2JMZ2 1700 aa24.8■■□□□ 1.56
PDLIM1-202ENST00000477757 MYO5AQ9Y4I1 1855 aaKnown RBP24.79■■□□□ 1.56
PDLIM1-202ENST00000477757 ACER1Q8TDN7 264 aa24.79■■□□□ 1.56
PDLIM1-202ENST00000477757 TMEM265A0A087WTH1 108 aa24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 PNMA6EA0A0J9YXQ4 647 aa24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 SEPT4O43236 478 aa24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 DYNLL1P63167 89 aaKnown RBP24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 RAB3GAP1Q15042 981 aa24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 ARHGAP45Q92619 1136 aa24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 GPR108Q9NPR9 543 aa24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 SERPINB13Q9UIV8 391 aa24.78■■□□□ 1.56
PDLIM1-202ENST00000477757 ADORA2AP29274 412 aa24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 TNNI3KQ59H18 835 aa24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 CCDC158Q5M9N0 1113 aa24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 C1orf53Q5VUE5 145 aa24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 DPP9Q86TI2 863 aa24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 SYMPKQ92797 1274 aaKnown RBP24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 ZNF512BQ96KM6 892 aaPredicted RBP24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 DBNDD2Q9BQY9 259 aa24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 RPAP3Q9H6T3 665 aaPredicted RBP24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 PIH1D3Q9NQM4 214 aaKnown RBP24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 FPGT-TNNI3KV9GXZ4 949 aa24.77■■□□□ 1.56
PDLIM1-202ENST00000477757 GNAI2P04899 355 aa24.76■■□□□ 1.55
PDLIM1-202ENST00000477757 ABCB5Q2M3G0 1257 aa24.76■■□□□ 1.55
PDLIM1-202ENST00000477757 SH3RF1Q7Z6J0 888 aa24.76■■□□□ 1.55
PDLIM1-202ENST00000477757 CERS3Q8IU89 383 aa24.76■■□□□ 1.55
PDLIM1-202ENST00000477757 TRIM43BA6NCK2 446 aa24.75■■□□□ 1.55
PDLIM1-202ENST00000477757 STRNO43815 780 aa24.75■■□□□ 1.55
PDLIM1-202ENST00000477757 ANO1Q5XXA6 986 aa24.75■■□□□ 1.55
PDLIM1-202ENST00000477757 TRIM43Q96BQ3 446 aaPredicted RBP24.75■■□□□ 1.55
PDLIM1-202ENST00000477757 MOV10L1Q9BXT6 1211 aaKnown RBP24.75■■□□□ 1.55
PDLIM1-202ENST00000477757 CYP7A1P22680 504 aa24.74■■□□□ 1.55
PDLIM1-202ENST00000477757 ADCYAP1R1P41586 468 aa24.74■■□□□ 1.55
PDLIM1-202ENST00000477757 ZAP70P43403 619 aa24.74■■□□□ 1.55
PDLIM1-202ENST00000477757 CERKLQ49MI3 558 aaPredicted RBP24.74■■□□□ 1.55
PDLIM1-202ENST00000477757 SHCBP1Q8NEM2 672 aa24.74■■□□□ 1.55
PDLIM1-202ENST00000477757 USP5P45974 858 aa24.73■■□□□ 1.55
PDLIM1-202ENST00000477757 RARSP54136 660 aaKnown RBP24.73■■□□□ 1.55
PDLIM1-202ENST00000477757 LRRC41Q15345 812 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms