RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 DUSP27Q5VZP5 1158 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 CDH24Q86UP0 819 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 RBBP8NLQ8NC74 664 aaPredicted RBP5.27□□□□□ -1.57
TARDBP-208ENST00000477447 OR6P1Q8NGX9 317 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 DNAJB8Q8NHS0 232 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 RIN3Q8TB24 985 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 CCDC74BQ96LY2 380 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 GMLQ99445 158 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 TM9SF2Q99805 663 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 LRRC4CQ9HCJ2 640 aa5.27□□□□□ -1.57
TARDBP-208ENST00000477447 PRDM5Q9NQX1 630 aaPredicted RBP5.27□□□□□ -1.57
TARDBP-208ENST00000477447 TNFRSF10CO14798 259 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 RGS13O14921 159 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 TGFB1P01137 390 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 GUCY2CP25092 1073 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 CPSF6Q16630 551 aaKnown RBP eCLIP5.26□□□□□ -1.572e-7■■■■■ 27.5
TARDBP-208ENST00000477447 ZNF746Q6NUN9 644 aaPredicted RBP5.26□□□□□ -1.57
TARDBP-208ENST00000477447 ARHGAP27Q6ZUM4 889 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 FAM169BQ8N8A8 192 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 FAM181AQ8N9Y4 354 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 PPP1R13LQ8WUF5 828 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 SREK1Q8WXA9 508 aaKnown RBP5.26□□□□□ -1.57
TARDBP-208ENST00000477447 GTF2IRD1Q9UHL9 959 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 LEMD3Q9Y2U8 911 aa5.26□□□□□ -1.57
TARDBP-208ENST00000477447 UBOX5O94941 541 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 ACRP10323 421 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 ATP2B1P20020 1258 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 ITGB7P26010 798 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 PPP2R5EQ16537 467 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 SLC51AQ86UW1 340 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 SLC9A7Q96T83 725 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 ZNF408Q9H9D4 720 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 PIM2Q9P1W9 311 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 CEP131Q9UPN4 1083 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 MAPK8IP1Q9UQF2 711 aa5.25□□□□□ -1.57
TARDBP-208ENST00000477447 PRR19A6NJB7 356 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 GNAT3A8MTJ3 354 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 SMAD7O15105 426 aaKnown RBP5.24□□□□□ -1.57
TARDBP-208ENST00000477447 CYP26A1O43174 497 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 ITIH2P19823 946 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 CYP7A1P22680 504 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 GTF2F1P35269 517 aaKnown RBP eCLIP5.24□□□□□ -1.577e-26■■■□□ 18.2
TARDBP-208ENST00000477447 ETFBP38117 255 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 ZYXQ15942 572 aaKnown RBP5.24□□□□□ -1.57
TARDBP-208ENST00000477447 TNNI3KQ59H18 835 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 SFRP5Q5T4F7 317 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 TTC6Q86TZ1 520 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 TAB3Q8N5C8 712 aaPredicted RBP5.24□□□□□ -1.57
TARDBP-208ENST00000477447 HEXIM2Q96MH2 286 aaKnown RBP5.24□□□□□ -1.57
TARDBP-208ENST00000477447 KREMEN1Q96MU8 473 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 SLC6A18Q96N87 628 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 PPP1R1BQ9UD71 204 aaPredicted RBP5.24□□□□□ -1.57
TARDBP-208ENST00000477447 PRKAG3Q9UGI9 489 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 U3KQE9 123 aa5.24□□□□□ -1.57
TARDBP-208ENST00000477447 CNTNAP4Q9C0A0 1308 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 PRR33A8MZF0 331 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 RBAK-RBAKDNI3L0D1 243 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 ADAM23O75077 832 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 CLEC3AO75596 197 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 STK10O94804 968 aaKnown RBP5.23□□□□□ -1.57
TARDBP-208ENST00000477447 CBX7O95931 251 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 CCNFP41002 786 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 UNC5AQ6ZN44 842 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 FAM214BQ7L5A3 538 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 TMEM192Q8IY95 271 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 C19orf47Q8N9M1 422 aaKnown RBP5.23□□□□□ -1.57
TARDBP-208ENST00000477447 RNF141Q8WVD5 230 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 HNRNPLLQ8WVV9 542 aaKnown RBP5.23□□□□□ -1.57
TARDBP-208ENST00000477447 DHX38Q92620 1227 aaKnown RBP5.23□□□□□ -1.57
TARDBP-208ENST00000477447 ZNF512BQ96KM6 892 aaPredicted RBP5.23□□□□□ -1.57
TARDBP-208ENST00000477447 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.23□□□□□ -1.57
TARDBP-208ENST00000477447 ACTR10Q9NZ32 417 aa5.23□□□□□ -1.57
TARDBP-208ENST00000477447 A0A1W2PQH9 124 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 IGF2BP3O00425 579 aaKnown RBP eCLIP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 CEACAM5P06731 702 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 FOSL1P15407 271 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 HOXA10P31260 410 aaPredicted RBP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 GRIK1P39086 918 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 OXCT1P55809 520 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 RNF4P78317 190 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 TDRD10Q5VZ19 366 aaKnown RBP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 LARP1BQ659C4 914 aaKnown RBP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 INTS3Q68E01 1043 aaKnown RBP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 ANKS3Q6ZW76 656 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 PLD6Q8N2A8 252 aaKnown RBP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 MFSD4AQ8N468 514 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 COX4I2Q96KJ9 171 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 ASPNQ9BXN1 380 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 MKRN2Q9H000 416 aaKnown RBP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 FAM86C1Q9NVL1 165 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 R3HCC1Q9Y3T6 440 aaKnown RBP5.22□□□□□ -1.57
TARDBP-208ENST00000477447 SLC12A7Q9Y666 1083 aa5.22□□□□□ -1.57
TARDBP-208ENST00000477447 FAM155AB1AL88 458 aaPredicted RBP5.21□□□□□ -1.58
TARDBP-208ENST00000477447 ZNF865P0CJ78 1059 aaPredicted RBP5.21□□□□□ -1.58
TARDBP-208ENST00000477447 KIR3DL1P43629 444 aa5.21□□□□□ -1.58
TARDBP-208ENST00000477447 CASP7P55210 303 aa5.21□□□□□ -1.58
TARDBP-208ENST00000477447 CKAP2LQ8IYA6 745 aa5.21□□□□□ -1.58
TARDBP-208ENST00000477447 DHRS1Q96LJ7 313 aa5.21□□□□□ -1.58
TARDBP-208ENST00000477447 TNKS2Q9H2K2 1166 aa5.21□□□□□ -1.58
TARDBP-208ENST00000477447 SUCOQ9UBS9 1254 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms