RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 ARPP21Q9UBL0 812 aaPredicted RBP14.72□□□□□ -0.05
PRKD3-209ENST00000477132 SWAP70Q9UH65 585 aa14.72□□□□□ -0.05
PRKD3-209ENST00000477132 HPS5Q9UPZ3 1129 aa14.72□□□□□ -0.05
PRKD3-209ENST00000477132 ROBO3Q96MS0 1386 aa14.72□□□□□ -0.05
PRKD3-209ENST00000477132 PARP14Q460N5 1801 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 CCDC85CA6NKD9 419 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 USP17L10C9JJH3 530 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 CDK8P49336 464 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 ZYXQ15942 572 aaKnown RBP14.71□□□□□ -0.05
PRKD3-209ENST00000477132 PKN2Q16513 984 aaKnown RBP14.71□□□□□ -0.05
PRKD3-209ENST00000477132 LRRFIP1Q32MZ4 808 aaKnown RBP14.71□□□□□ -0.05
PRKD3-209ENST00000477132 SBK1Q52WX2 424 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 DDRGK1Q96HY6 314 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 FAM227BQ96M60 508 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 EFCC1Q9HA90 598 aa14.71□□□□□ -0.05
PRKD3-209ENST00000477132 DOCK3Q8IZD9 2030 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 A0A0D9SFI3 127 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 A0A1W2PRG0 241 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 C19orf81C9J6K1 198 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 MPHOSPH10O00566 681 aaKnown RBP14.7□□□□□ -0.06
PRKD3-209ENST00000477132 GNAT2P19087 354 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
PRKD3-209ENST00000477132 GIMAP6Q6P9H5 292 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 IFNL3Q8IZI9 196 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 STK11IPQ8N1F8 1099 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 ASCC2Q9H1I8 757 aaPredicted RBP14.7□□□□□ -0.06
PRKD3-209ENST00000477132 CABP5Q9NP86 173 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 PTPN22Q9Y2R2 807 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 RLFQ13129 1914 aa14.7□□□□□ -0.06
PRKD3-209ENST00000477132 MINDY4BA8MYZ0 360 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 TRIM6-TRIM34B2RNG4 842 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 PATL2C9JE40 543 aaKnown RBP14.69□□□□□ -0.06
PRKD3-209ENST00000477132 TDO2P48775 406 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 VPS53Q5VIR6 699 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 SIAH1Q8IUQ4 282 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 AMOTL1Q8IY63 956 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
PRKD3-209ENST00000477132 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 TRIM47Q96LD4 638 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 C12orf42Q96LP6 360 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 FEZ1Q99689 392 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 TMOD4Q9NZQ9 345 aa14.69□□□□□ -0.06
PRKD3-209ENST00000477132 MYH4Q9Y623 1939 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 PEX10O60683 326 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 APPP05067 770 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 HOXA7P31268 230 aaPredicted RBP14.68□□□□□ -0.06
PRKD3-209ENST00000477132 PSMC4P43686 418 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 NMIQ13287 307 aaPredicted RBP14.68□□□□□ -0.06
PRKD3-209ENST00000477132 USP17L2Q6R6M4 530 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 POTEEQ6S8J3 1075 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 TMEM179Q6ZVK1 233 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 ANKRD13CQ8N6S4 541 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.68□□□□□ -0.06
PRKD3-209ENST00000477132 KIAA1683Q9H0B3 1180 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 PNMA3Q9UL41 463 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 PTCH2Q9Y6C5 1203 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 PLXNB2O15031 1838 aa14.68□□□□□ -0.06
PRKD3-209ENST00000477132 RBBP6Q7Z6E9 1792 aaKnown RBP14.68□□□□□ -0.06
PRKD3-209ENST00000477132 A0A0G2JMZ2 1700 aa14.67□□□□□ -0.06
PRKD3-209ENST00000477132 CENPFP49454 3210 aa14.67□□□□□ -0.06
PRKD3-209ENST00000477132 RASA1P20936 1047 aa14.67□□□□□ -0.06
PRKD3-209ENST00000477132 KIAA1755Q5JYT7 1200 aa14.67□□□□□ -0.06
PRKD3-209ENST00000477132 ZNF589Q86UQ0 364 aaPredicted RBP14.67□□□□□ -0.06
PRKD3-209ENST00000477132 HELLSQ9NRZ9 838 aa14.67□□□□□ -0.06
PRKD3-209ENST00000477132 LAMA4Q16363 1823 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 GSPT1P15170 499 aaKnown RBP14.66□□□□□ -0.06
PRKD3-209ENST00000477132 VCAM1P19320 739 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 SDSP20132 328 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 OSBPP22059 807 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 PABPC4Q13310 644 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRKD3-209ENST00000477132 KIF22Q14807 665 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 CCDC17Q96LX7 622 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 P2RX7Q99572 595 aaKnown RBP14.66□□□□□ -0.06
PRKD3-209ENST00000477132 NAPBQ9H115 298 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 TXNRD2Q9NNW7 524 aa14.66□□□□□ -0.06
PRKD3-209ENST00000477132 COL11A1P12107 1806 aaPredicted RBP14.65□□□□□ -0.06
PRKD3-209ENST00000477132 HAX1O00165 279 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 PRDM1O75626 825 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 USP14P54578 494 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 SOX10P56693 466 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 HERVK_113P62684 666 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
PRKD3-209ENST00000477132 ICA1Q05084 483 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 FAM110CQ1W6H9 321 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 MCMDC2Q4G0Z9 681 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 TACC3Q9Y6A5 838 aa14.65□□□□□ -0.06
PRKD3-209ENST00000477132 FMNL1O95466 1100 aaPredicted RBP14.64□□□□□ -0.07
PRKD3-209ENST00000477132 EEF2P13639 858 aaKnown RBP14.64□□□□□ -0.07
PRKD3-209ENST00000477132 GCLCP48506 637 aaPredicted RBP14.64□□□□□ -0.07
PRKD3-209ENST00000477132 PPARAQ07869 468 aa14.64□□□□□ -0.07
PRKD3-209ENST00000477132 TTC22Q5TAA0 569 aa14.64□□□□□ -0.07
PRKD3-209ENST00000477132 RPAP3Q9H6T3 665 aaPredicted RBP14.64□□□□□ -0.07
PRKD3-209ENST00000477132 SRRDQ9UH36 339 aa14.64□□□□□ -0.07
PRKD3-209ENST00000477132 GABRQQ9UN88 632 aa14.64□□□□□ -0.07
PRKD3-209ENST00000477132 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
PRKD3-209ENST00000477132 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 GNRH1P01148 92 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 FCGRTP55899 365 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms