RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SLC15A5A6NIM6 579 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 DNM1LO00429 736 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 GLRX3O76003 335 aaKnown RBP13.98□□□□□ -0.17
BRCA1-213ENST00000476777 IGHA2P01877 340 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 HOXC6P09630 235 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 PTPREP23469 700 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 RTP1P59025 263 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 SHHQ15465 462 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 NAA16Q6N069 864 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-213ENST00000476777 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 MAFAQ8NHW3 353 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-213ENST00000476777 C12orf42Q96LP6 360 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 TRIM34Q9BYJ4 488 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
BRCA1-213ENST00000476777 PRKAG2Q9UGJ0 569 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 LTBP2Q14767 1821 aa13.98□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L15C9J2P7 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L13C9JLJ4 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L11C9JVI0 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L18D6R9N7 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L22D6RA61 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L17D6RBQ6 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L19D6RCP7 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L20D6RJB6 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 GH2P01242 217 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 UQCRFS1P1P0C7P4 283 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 CNGA1P29973 690 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 CYP2C19P33261 490 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L24Q0WX57 530 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 GRB14Q14449 540 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 C9orf50Q5SZB4 431 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 CATSPERGQ6ZRH7 1159 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 NPLOC4Q8TAT6 608 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 CDCA7LQ96GN5 454 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 PRDM6Q9NQX0 595 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 RLFQ13129 1914 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 FOCADQ5VW36 1801 aa13.97□□□□□ -0.17
BRCA1-213ENST00000476777 GNAI3P08754 354 aa13.96□□□□□ -0.17
BRCA1-213ENST00000476777 WDR78Q5VTH9 848 aa13.96□□□□□ -0.17
BRCA1-213ENST00000476777 LBX2Q6XYB7 198 aa13.96□□□□□ -0.17
BRCA1-213ENST00000476777 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-213ENST00000476777 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
BRCA1-213ENST00000476777 BTBD7Q9P203 1132 aa13.96□□□□□ -0.17
BRCA1-213ENST00000476777 SAP30BPQ9UHR5 308 aaKnown RBP13.96□□□□□ -0.17
BRCA1-213ENST00000476777 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.17
BRCA1-213ENST00000476777 HLA-DOAP06340 250 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 CYBAP13498 195 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 VCAM1P19320 739 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 SMAD3P84022 425 aaKnown RBP13.95□□□□□ -0.18
BRCA1-213ENST00000476777 ZYXQ15942 572 aaKnown RBP13.95□□□□□ -0.18
BRCA1-213ENST00000476777 GJC2Q5T442 439 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-213ENST00000476777 ATF7IPQ6VMQ6 1270 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 SLC39A5Q6ZMH5 540 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
BRCA1-213ENST00000476777 MYLIPQ8WY64 445 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 FEZ1Q99689 392 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 IVNS1ABPQ9Y6Y0 642 aa13.95□□□□□ -0.18
BRCA1-213ENST00000476777 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-213ENST00000476777 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-213ENST00000476777 USP14P54578 494 aa13.94□□□□□ -0.18
BRCA1-213ENST00000476777 SNX17Q15036 470 aa13.94□□□□□ -0.18
BRCA1-213ENST00000476777 TATDN1Q6P1N9 297 aa13.94□□□□□ -0.18
BRCA1-213ENST00000476777 ARRDC4Q8NCT1 418 aa13.94□□□□□ -0.18
BRCA1-213ENST00000476777 BADQ92934 168 aa13.94□□□□□ -0.18
BRCA1-213ENST00000476777 KIAA1683Q9H0B3 1180 aa13.94□□□□□ -0.18
BRCA1-213ENST00000476777 MYO5AQ9Y4I1 1855 aaKnown RBP13.94□□□□□ -0.18
BRCA1-213ENST00000476777 CHD9Q3L8U1 2897 aa13.93□□□□□ -0.18
BRCA1-213ENST00000476777 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-213ENST00000476777 DYNLL1P63167 89 aaKnown RBP13.93□□□□□ -0.18
BRCA1-213ENST00000476777 G3BP1Q13283 466 aaKnown RBP eCLIP13.93□□□□□ -0.18
BRCA1-213ENST00000476777 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
BRCA1-213ENST00000476777 OLFML2BQ68BL8 750 aa13.93□□□□□ -0.18
BRCA1-213ENST00000476777 ACER1Q8TDN7 264 aa13.93□□□□□ -0.18
BRCA1-213ENST00000476777 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-213ENST00000476777 PDLIM7Q9NR12 457 aa13.93□□□□□ -0.18
BRCA1-213ENST00000476777 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
BRCA1-213ENST00000476777 MYH1P12882 1939 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 PNMA6EA0A0J9YXQ4 647 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 TRIM43BA6NCK2 446 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 IGSF3O75054 1194 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-213ENST00000476777 RAB3GAP1Q15042 981 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 TTC39AQ5SRH9 613 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 TRIM43Q96BQ3 446 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-213ENST00000476777 DBNDD2Q9BQY9 259 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
BRCA1-213ENST00000476777 SERPINB13Q9UIV8 391 aa13.92□□□□□ -0.18
BRCA1-213ENST00000476777 KBTBD13C9JR72 458 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 SEPT4O43236 478 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 FOSL2P15408 326 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 ADORA2AP29274 412 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 TNNI3KQ59H18 835 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 DPP9Q86TI2 863 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 MOV10L1Q9BXT6 1211 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 305.9 ms