RNA–Protein interactions for RNA: ENST00000476613.1

IRF1-209, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-209ENST00000476613 SYNGAP1Q96PV0 1343 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 SEPT4O43236 478 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 STRNO43815 780 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 PEX10O60683 326 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 CNMDO75829 334 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 MS4A1P11836 297 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 DNAJB2P25686 324 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 MRPS5P82675 430 aaKnown RBP9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP17L24Q0WX57 530 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 MAP3K12Q12852 859 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 MVPQ14764 893 aaKnown RBP9.93□□□□□ -0.82
IRF1-209ENST00000476613 TRIM60Q495X7 471 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 GJC2Q5T442 439 aaPredicted RBP9.93□□□□□ -0.82
IRF1-209ENST00000476613 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 USP38Q8NB14 1042 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 ZNF384Q8TF68 577 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 GAS2L1Q99501 681 aaPredicted RBP9.93□□□□□ -0.82
IRF1-209ENST00000476613 C1QTNF1Q9BXJ1 281 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 ZNF576Q9H609 170 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 THEGQ9P2T0 379 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 AKAP2Q9Y2D5 859 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 CDH23Q9H251 3354 aa9.93□□□□□ -0.82
IRF1-209ENST00000476613 KIAA0355O15063 1070 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 BAG3O95817 575 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 UBTFL1P0CB47 393 aaPredicted RBP9.92□□□□□ -0.82
IRF1-209ENST00000476613 PLCG2P16885 1265 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 CYP2C19P33261 490 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 USP14P54578 494 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 CATSPERGQ6ZRH7 1159 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 TEX11Q8IYF3 940 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 TRPV1Q8NER1 839 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 NPLOC4Q8TAT6 608 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 NOL10Q9BSC4 688 aaKnown RBP9.92□□□□□ -0.82
IRF1-209ENST00000476613 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 SIL1Q9H173 461 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 COPRSQ9NQ92 184 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 SLC5A4Q9NY91 659 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 ZBTB21Q9ULJ3 1066 aa9.92□□□□□ -0.82
IRF1-209ENST00000476613 LAMA2P24043 3122 aaKnown RBP9.91□□□□□ -0.82
IRF1-209ENST00000476613 CLTBP09497 229 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 ADORA1P30542 326 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 TIMM10P62072 90 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 FPGSQ05932 587 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 LRRC41Q15345 812 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 SH3RF1Q7Z6J0 888 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 ADAMTS19Q8TE59 1207 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 TIFAQ96CG3 184 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 UHRF1Q96T88 793 aaPredicted RBP9.91□□□□□ -0.82
IRF1-209ENST00000476613 DNAJC18Q9H819 358 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 RAPGEFL1Q9UHV5 662 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 NRBP1Q9UHY1 535 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 PHF24Q9UPV7 400 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 PRUNE2Q8WUY3 3088 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 ZNF236Q9UL36 1845 aa9.91□□□□□ -0.82
IRF1-209ENST00000476613 A0A1B0GUL7 405 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 RAG1P15918 1043 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 ADCYAP1R1P41586 468 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 PPP4CP60510 307 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 JAG1P78504 1218 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 TLE2Q04725 743 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 WDR78Q5VTH9 848 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 CCDC174Q6PII3 467 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 DPP9Q86TI2 863 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 FTSJ3Q8IY81 847 aaKnown RBP9.9□□□□□ -0.82
IRF1-209ENST00000476613 ABRAQ8N0Z2 381 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 CRACR2BQ8N4Y2 399 aaPredicted RBP9.9□□□□□ -0.82
IRF1-209ENST00000476613 TMEM57Q8N5G2 664 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 SPATA5Q8NB90 893 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 SHCBP1Q8NEM2 672 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 CLUAP1Q96AJ1 413 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 XAGE2Q96GT9 111 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 TOX2Q96NM4 488 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 MEIS3Q99687 375 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 KIAA1683Q9H0B3 1180 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 HMG20BQ9P0W2 317 aa9.9□□□□□ -0.82
IRF1-209ENST00000476613 SIPA1L1O43166 1804 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 GNAI2P04899 355 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 HLA-DOAP06340 250 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 ITGB8P26012 769 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 ARID4AP29374 1257 aaPredicted RBP9.89□□□□□ -0.83
IRF1-209ENST00000476613 EPHB4P54760 987 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 MTX1Q13505 466 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 TATDN1Q6P1N9 297 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 ANKRD33Q7Z3H0 272 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 RNF180Q86T96 592 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 SH3RF3Q8TEJ3 882 aaPredicted RBP9.89□□□□□ -0.83
IRF1-209ENST00000476613 TSPYL2Q9H2G4 693 aaPredicted RBP9.89□□□□□ -0.83
IRF1-209ENST00000476613 RAI14Q9P0K7 980 aa9.89□□□□□ -0.83
IRF1-209ENST00000476613 BTBD7Q9P203 1132 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms