RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZYXQ15942 572 aaKnown RBP13.01□□□□□ -0.33
SEC13-214ENST00000476597 C12orf60Q5U649 245 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 KBTBD3Q8NAB2 608 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 GTF3C2Q8WUA4 911 aaPredicted RBP13.01□□□□□ -0.33
SEC13-214ENST00000476597 SHISA4Q96DD7 197 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 DYNLL2Q96FJ2 89 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 FEZ1Q99689 392 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
SEC13-214ENST00000476597 A0A1W2PRG0 241 aa13□□□□□ -0.33
SEC13-214ENST00000476597 USP17L12C9JPN9 530 aa13□□□□□ -0.33
SEC13-214ENST00000476597 USP17L21D6R901 530 aa13□□□□□ -0.33
SEC13-214ENST00000476597 INHAP05111 366 aa13□□□□□ -0.33
SEC13-214ENST00000476597 TSHZ3Q63HK5 1081 aa13□□□□□ -0.33
SEC13-214ENST00000476597 SLC44A5Q8NCS7 719 aa13□□□□□ -0.33
SEC13-214ENST00000476597 GPATCH3Q96I76 525 aa13□□□□□ -0.33
SEC13-214ENST00000476597 STRBPQ96SI9 672 aaKnown RBP13□□□□□ -0.33
SEC13-214ENST00000476597 PTPRFP10586 1907 aa13□□□□□ -0.33
SEC13-214ENST00000476597 CYP2D7A0A087X1C5 515 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
SEC13-214ENST00000476597 SGPL1O95470 568 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 CAPN2P17655 700 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 VCAM1P19320 739 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 MAPK4P31152 587 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 CDK8P49336 464 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 ERVK-9P63128 1117 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 ERVK-24P63145 666 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 LBX2Q6XYB7 198 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 SIAH1Q8IUQ4 282 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 U2AF1L4Q8WU68 220 aaKnown RBP12.99□□□□□ -0.33
SEC13-214ENST00000476597 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
SEC13-214ENST00000476597 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 RNF113AO15541 343 aaKnown RBP12.98□□□□□ -0.33
SEC13-214ENST00000476597 CNMDO75829 334 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 USP6NLQ92738 828 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 CCDC17Q96LX7 622 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 PAGR1Q9BTK6 254 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 PORCNQ9H237 461 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 LOC285556D6RIA3 1793 aa12.98□□□□□ -0.33
SEC13-214ENST00000476597 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
SEC13-214ENST00000476597 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
SEC13-214ENST00000476597 HMGCRP04035 888 aa12.97□□□□□ -0.33
SEC13-214ENST00000476597 ZFYP08048 801 aaPredicted RBP12.97□□□□□ -0.33
SEC13-214ENST00000476597 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
SEC13-214ENST00000476597 AKR1B1P15121 316 aa12.97□□□□□ -0.33
SEC13-214ENST00000476597 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
SEC13-214ENST00000476597 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
SEC13-214ENST00000476597 APPBP2Q92624 585 aa12.97□□□□□ -0.33
SEC13-214ENST00000476597 RPAP3Q9H6T3 665 aaPredicted RBP12.97□□□□□ -0.33
SEC13-214ENST00000476597 PAK6Q9NQU5 681 aaPredicted RBP12.97□□□□□ -0.33
SEC13-214ENST00000476597 TMX2Q9Y320 296 aa12.97□□□□□ -0.33
SEC13-214ENST00000476597 ERC2O15083 957 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 CYP2B6P20813 491 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 SBK1Q52WX2 424 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 MORN1Q5T089 497 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 GPR142Q7Z601 462 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 CCAR1Q8IX12 1150 aaKnown RBP12.96□□□□□ -0.33
SEC13-214ENST00000476597 PI4K2BQ8TCG2 481 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 SOCS4Q8WXH5 440 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 DEFB118Q96PH6 123 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 HOXC10Q9NYD6 342 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
SEC13-214ENST00000476597 ARPP21Q9UBL0 812 aaPredicted RBP12.96□□□□□ -0.33
SEC13-214ENST00000476597 RBBP6Q7Z6E9 1792 aaKnown RBP12.96□□□□□ -0.34
SEC13-214ENST00000476597 CEP290O15078 2479 aa12.96□□□□□ -0.34
SEC13-214ENST00000476597 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 RPTORQ8N122 1335 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 SPDYE16A6NNV3 312 aaPredicted RBP12.95□□□□□ -0.34
SEC13-214ENST00000476597 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
SEC13-214ENST00000476597 SLC34A2O95436 690 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 TFRCP02786 760 aaKnown RBP12.95□□□□□ -0.34
SEC13-214ENST00000476597 CCNA1P78396 465 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 TRIM32Q13049 653 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 COG2Q14746 738 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
SEC13-214ENST00000476597 TRIB2Q92519 343 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 YTHDC1Q96MU7 727 aaKnown RBP12.95□□□□□ -0.34
SEC13-214ENST00000476597 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 KANSL2Q9H9L4 492 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 ARHGEF10LQ9HCE6 1279 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 MYH1P12882 1939 aa12.95□□□□□ -0.34
SEC13-214ENST00000476597 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
SEC13-214ENST00000476597 GPAA1O43292 621 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 GNAT2P19087 354 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 RGS2P41220 211 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 ICA1Q05084 483 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms