RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 USP17L11C9JVI0 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L21D6R901 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L18D6R9N7 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L22D6RA61 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L17D6RBQ6 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L19D6RCP7 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L20D6RJB6 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 GPAA1O43292 621 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 PRKAB2O43741 272 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
CCM2-208ENST00000476594 UBXN2AP68543 259 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 USP17L24Q0WX57 530 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 STRBPQ96SI9 672 aaKnown RBP12.22□□□□□ -0.45
CCM2-208ENST00000476594 ARHGAP39Q9C0H5 1083 aa12.22□□□□□ -0.45
CCM2-208ENST00000476594 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
CCM2-208ENST00000476594 GRK4P32298 578 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 CDK8P49336 464 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 PDE1AP54750 535 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 HERVK_113P62684 666 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 CCNA1P78396 465 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 ICA1Q05084 483 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.45
CCM2-208ENST00000476594 SBK1Q52WX2 424 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 SMC5Q8IY18 1101 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 SLAIN1Q8ND83 568 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 EXOC6Q8TAG9 804 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 OSBP2Q969R2 916 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 MKNK2Q9HBH9 465 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 BIN2Q9UBW5 565 aaPredicted RBP12.21□□□□□ -0.45
CCM2-208ENST00000476594 STAP2Q9UGK3 403 aa12.21□□□□□ -0.45
CCM2-208ENST00000476594 MYH8P13535 1937 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
CCM2-208ENST00000476594 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
CCM2-208ENST00000476594 SEPT2Q15019 361 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 SLFNL1Q499Z3 407 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 CHD1LQ86WJ1 897 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 GPRC5AQ8NFJ5 357 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 LPAR1Q92633 364 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 ZNF333Q96JL9 665 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 LNPKQ9C0E8 428 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 NAPBQ9H115 298 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 MORF4L1Q9UBU8 362 aa12.2□□□□□ -0.46
CCM2-208ENST00000476594 SALL3Q9BXA9 1300 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 GSG1L2A8MUP6 293 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 MINDY4BA8MYZ0 360 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 TRIM6-TRIM34B2RNG4 842 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 CYP2D6P10635 497 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 CAPN2P17655 700 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 VCAM1P19320 739 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 MAPK4P31152 587 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 MFAP1P55081 439 aaKnown RBP12.19□□□□□ -0.46
CCM2-208ENST00000476594 JAG1P78504 1218 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 PRKCZQ05513 592 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 PDE4BQ07343 736 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 IRF5Q13568 498 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 B4GALNT3Q6L9W6 998 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 ZNF444Q8N0Y2 327 aaPredicted RBP12.19□□□□□ -0.46
CCM2-208ENST00000476594 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
CCM2-208ENST00000476594 SOCS4Q8WXH5 440 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 DYNLL2Q96FJ2 89 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 EMILIN3Q9NT22 766 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 RABGAP1Q9Y3P9 1069 aa12.19□□□□□ -0.46
CCM2-208ENST00000476594 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
CCM2-208ENST00000476594 ROBO3Q96MS0 1386 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
CCM2-208ENST00000476594 ZMYM1Q5SVZ6 1142 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 SLC44A5Q8NCS7 719 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 PXYLP1Q8TE99 480 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 P2RX7Q99572 595 aaKnown RBP12.18□□□□□ -0.46
CCM2-208ENST00000476594 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 TANGO6Q9C0B7 1094 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 HOXC10Q9NYD6 342 aa12.18□□□□□ -0.46
CCM2-208ENST00000476594 MGAMO43451 1857 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 CYP2D7A0A087X1C5 515 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 M0R2C6 588 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 HIP1O00291 1037 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
CCM2-208ENST00000476594 ADCY3O60266 1144 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 CHGBP05060 677 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 AKR1B1P15121 316 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 GUCY1A2P33402 732 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 FLT3LGP49771 235 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 ERVK-9P63128 1117 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 ERVK-24P63145 666 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 NUCB1Q02818 461 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 LBX2Q6XYB7 198 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
CCM2-208ENST00000476594 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 MB21D1Q8N884 522 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 ACER1Q8TDN7 264 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms