RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SOX4Q06945 474 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 TRIM28Q13263 835 aaKnown RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 TTLL4Q14679 1199 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 PWP2Q15269 919 aaKnown RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 GNPTABQ3T906 1256 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 RPUSD2Q8IZ73 545 aaKnown RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 SVOPQ8N4V2 548 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 C12orf50Q8NA57 414 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 KCT2Q8NC54 265 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 JDP2Q8WYK2 163 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 DHRS1Q96LJ7 313 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 KIF2CQ99661 725 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 DPH2Q9BQC3 489 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 PLVAPQ9BX97 442 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 SSU72Q9NP77 194 aaKnown RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 TMEM260Q9NX78 707 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 ZNF214Q9UL59 606 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-207ENST00000476169 LEMD3Q9Y2U8 911 aa5.68□□□□□ -1.5
VPS13D-207ENST00000476169 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 RGS13O14921 159 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 SUSD5O60279 629 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 RNGTTO60942 597 aaKnown RBP5.67□□□□□ -1.5
VPS13D-207ENST00000476169 WFS1O76024 890 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 NEFMP07197 916 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 DRD2P14416 443 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 GBP1P32455 592 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 SQSTM1Q13501 440 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 NKG7Q16617 165 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 BBS9Q3SYG4 887 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 ZNF385CQ66K41 422 aaPredicted RBP5.67□□□□□ -1.5
VPS13D-207ENST00000476169 FDX2Q6P4F2 183 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 IGF2-ASQ6U949 168 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.67□□□□□ -1.5
VPS13D-207ENST00000476169 KLHL6Q8WZ60 621 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 ISL2Q96A47 359 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 SLC6A18Q96N87 628 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 CEP89Q96ST8 783 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 FAN1Q9Y2M0 1017 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
VPS13D-207ENST00000476169 IQCA1LA6NCM1 817 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 PIK3R2O00459 728 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 GNB5O14775 395 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 ELNP15502 786 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 ASPAP45381 313 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 PMS1P54277 932 aaKnown RBP5.66□□□□□ -1.5
VPS13D-207ENST00000476169 GYS2P54840 703 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 SNRPNP63162 240 aaKnown RBP5.66□□□□□ -1.5
VPS13D-207ENST00000476169 AMPD3Q01432 767 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 SLC10A6Q3KNW5 377 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 PRRT3Q5FWE3 981 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 PRAMEF13Q5VWM6 474 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 LINC00114Q6XXX2 140 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 C16orf86Q6ZW13 317 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 UBE3DQ7Z6J8 389 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 FMNL3Q8IVF7 1028 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 MORC4Q8TE76 937 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 CCDC74BQ96LY2 380 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 EPN3Q9H201 632 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 TMX1Q9H3N1 280 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 FAM86C1Q9NVL1 165 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 GABBR1Q9UBS5 961 aa5.66□□□□□ -1.5
VPS13D-207ENST00000476169 CCDC194A0A1B0GVG4 234 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 CLEC3AO75596 197 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 UBOX5O94941 541 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 TIAF1O95411 115 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 CST3P01034 146 aaPredicted RBP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 NAT2P11245 290 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 CNGA1P29973 690 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 CAP2P40123 477 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 SLBPQ14493 270 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 ODR4Q5SWX8 454 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 TDRD10Q5VZ19 366 aaKnown RBP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 ANKRD34AQ69YU3 496 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 TMEM192Q8IY95 271 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 CCDC146Q8IYE0 955 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 AGGF1Q8N302 714 aaeCLIP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 JMYQ8N9B5 988 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 C2CD4AQ8NCU7 369 aaPredicted RBP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 ZSWIM2Q8NEG5 633 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 BAHD1Q8TBE0 780 aaPredicted RBP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 CYB5D2Q8WUJ1 264 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 SPATA9Q9BWV2 254 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 FOXQ1Q9C009 403 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 GSX1Q9H4S2 264 aaPredicted RBP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 SUCOQ9UBS9 1254 aaKnown RBP5.65□□□□□ -1.5
VPS13D-207ENST00000476169 MKL2Q9ULH7 1088 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 ACTL7BQ9Y614 415 aa5.65□□□□□ -1.5
VPS13D-207ENST00000476169 AGRPO00253 132 aa5.64□□□□□ -1.51
VPS13D-207ENST00000476169 TP53P04637 393 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-207ENST00000476169 PDGFRBP09619 1106 aa5.64□□□□□ -1.51
VPS13D-207ENST00000476169 FAM153BP0C7A2 387 aa5.64□□□□□ -1.51
VPS13D-207ENST00000476169 SV2CQ496J9 727 aa5.64□□□□□ -1.51
VPS13D-207ENST00000476169 KIAA0907Q7Z7F0 614 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-207ENST00000476169 PPFIBP1Q86W92 1011 aa5.64□□□□□ -1.51
VPS13D-207ENST00000476169 CCAR1Q8IX12 1150 aaKnown RBP5.64□□□□□ -1.51
VPS13D-207ENST00000476169 SMYD4Q8IYR2 804 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms