RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 APPP05067 770 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 TDO2P48775 406 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 HERVK_113P62684 666 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 JAG1P78504 1218 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 SLFNL1Q499Z3 407 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 GIMAP6Q6P9H5 292 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 C12orf42Q96LP6 360 aa16.52■□□□□ 0.24
TMCO1-205ENST00000476143 GPAA1O43292 621 aa16.51■□□□□ 0.23
TMCO1-205ENST00000476143 MYCP01106 439 aaPredicted RBP16.51■□□□□ 0.23
TMCO1-205ENST00000476143 CYP2D6P10635 497 aa16.51■□□□□ 0.23
TMCO1-205ENST00000476143 SEPT2Q15019 361 aa16.51■□□□□ 0.23
TMCO1-205ENST00000476143 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
TMCO1-205ENST00000476143 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
TMCO1-205ENST00000476143 MORF4L1Q9UBU8 362 aa16.51■□□□□ 0.23
TMCO1-205ENST00000476143 SLC3A2P08195 630 aaKnown RBP16.5■□□□□ 0.23
TMCO1-205ENST00000476143 CTGFP29279 349 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 CDK8P49336 464 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 FLT3LGP49771 235 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 CCNA1P78396 465 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 ICA1Q05084 483 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 NKX2-3Q8TAU0 364 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 PI4K2BQ8TCG2 481 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 DYNLL2Q96FJ2 89 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 STRBPQ96SI9 672 aaKnown RBP16.5■□□□□ 0.23
TMCO1-205ENST00000476143 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
TMCO1-205ENST00000476143 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 MKNK2Q9HBH9 465 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 EMILIN3Q9NT22 766 aa16.5■□□□□ 0.23
TMCO1-205ENST00000476143 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
TMCO1-205ENST00000476143 ADCY3O60266 1144 aa16.49■□□□□ 0.23
TMCO1-205ENST00000476143 VCAM1P19320 739 aa16.49■□□□□ 0.23
TMCO1-205ENST00000476143 IRF5Q13568 498 aa16.49■□□□□ 0.23
TMCO1-205ENST00000476143 SLC44A5Q8NCS7 719 aa16.49■□□□□ 0.23
TMCO1-205ENST00000476143 PXYLP1Q8TE99 480 aa16.49■□□□□ 0.23
TMCO1-205ENST00000476143 EVI5LQ96CN4 794 aa16.49■□□□□ 0.23
TMCO1-205ENST00000476143 POTEFA5A3E0 1075 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 CHGBP05060 677 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 MAPK4P31152 587 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 SBK1Q52WX2 424 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 CTR9Q6PD62 1173 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 ACER1Q8TDN7 264 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
TMCO1-205ENST00000476143 LPAR1Q92633 364 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 OSBP2Q969R2 916 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 KANSL2Q9H9L4 492 aa16.48■□□□□ 0.23
TMCO1-205ENST00000476143 CYP2D7A0A087X1C5 515 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 ERVK-9P63128 1117 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 ERVK-24P63145 666 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 ATP2B2Q01814 1243 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 SOCS4Q8WXH5 440 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 NUDT12Q9BQG2 462 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 RNF208Q9H0X6 261 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 NAPBQ9H115 298 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
TMCO1-205ENST00000476143 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 RABGAP1Q9Y3P9 1069 aa16.47■□□□□ 0.23
TMCO1-205ENST00000476143 KIAA0100Q14667 2235 aaKnown RBP16.47■□□□□ 0.23
TMCO1-205ENST00000476143 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 TRIM6-TRIM34B2RNG4 842 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 PATL2C9JE40 543 aaKnown RBP16.46■□□□□ 0.23
TMCO1-205ENST00000476143 M0R2C6 588 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 AKR1B1P15121 316 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 GUCY1A2P33402 732 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 PDE1AP54750 535 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 PDE4BQ07343 736 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
TMCO1-205ENST00000476143 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 GOPCQ9HD26 462 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 HOXC10Q9NYD6 342 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
TMCO1-205ENST00000476143 SUPT16HQ9Y5B9 1047 aaKnown RBP16.46■□□□□ 0.23
TMCO1-205ENST00000476143 RAD21O60216 631 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 CCL5P13501 91 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 CAPN2P17655 700 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 EN2P19622 333 aaPredicted RBP16.45■□□□□ 0.22
TMCO1-205ENST00000476143 EVX2Q03828 476 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 TICAM2Q86XR7 235 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 TRMT44Q8IYL2 757 aaKnown RBP16.45■□□□□ 0.22
TMCO1-205ENST00000476143 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 IVNS1ABPQ9Y6Y0 642 aa16.45■□□□□ 0.22
TMCO1-205ENST00000476143 ROBO3Q96MS0 1386 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 HMGCRP04035 888 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 INHAP05111 366 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms